Setaria viridis (green foxtail): 117857429
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Entry
117857429 CDS
T07951
Name
(RefSeq) neutral ceramidase
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00600
Sphingolipid metabolism
svs01100
Metabolic pathways
Module
svs_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117857429
Enzymes [BR:
svs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
117857429
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
MSP1a
Motif
Other DBs
NCBI-GeneID:
117857429
NCBI-ProteinID:
XP_034595975
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Position
5:complement(29412149..29418592)
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AA seq
786 aa
AA seq
DB search
MMEASSCLRYRVCGSGSRMIWLCLFLVLILQSCSPALSDSPYLVGMGSYDITGPAADVNM
MGYANTEQIASGIHFRLKARAFIVAEPNGKRVVFVNLDACMASQLVTIKVLERLKARYGD
LYNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVNGIEQCIVEAHNNLRPG
KIYVNKGDLLDAGVNRSPSAYLNNPPEERSKYQYNVDKEMTLIKFVDDELGPVGSFNWFA
THGTSMSRTNSLISGDNKGAAARFMEDWAEQNGIPKQGAHVTNDGLESLHKISGLPRRVS
SIIPEPTEITDDLVQLASSYEASGGRRLSGSSITRRIRSTQQNKPKFVSAFCQSNCGDVS
PNVLGTFCIDTGLPCDFNHSTCNGKNELCYGRGPGYPDEFESTRIIGNRQFLKAVDLFNS
ASEEIQGRIDYRHTYLDFSQLEVNVPTSTGGQQVVKTCPAAMGFAFAAGTTDGPGAFDFK
QGDVKGNPFWRLVRNLLKTPGKEQVECQAPKPILLDTGEMKEPYDWAPAILPIQIIRIGQ
MVILCVPGEFTTMAGRRLRDAVKEVLTSDNSGEFNDIHVVLAGLSNTYSQYITTFEEYQI
QRYEGASTLYGPHTLSAYIQEFQKLATAMVANKEIPTNFQPPDMLDRQIGLLPGVMFDST
PPGVKFGDVSSDVPASSTFRKGNIVNATFYSACPRNDLLTDGTFALVEKLDGSDNWVPAY
DDDDWSLRFKWSRPAKLSPRSFATLEWTIPEDAPSGVYRLRHFGASKTLLGSIRHFTGTS
RAFAVR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggcatcatcttgcttgcgctaccgcgtttgtggttctggttcgcggatgata
tggctatgcctttttctagtactcattcttcagagttgcagccccgcactttcagactca
ccgtatttggttggtatggggagctacgacataacagggcctgcggcagatgttaacatg
atgggatatgcaaataccgagcagatcgcatcaggaattcacttcaggctaaaggcccgt
gcattcattgttgctgagcccaatggaaagcgtgttgtgtttgtgaatcttgatgcttgc
atggcatcacagcttgttactataaaggtgcttgaaaggctcaaagcaaggtatggagat
ctttataatgagaacaatgtggctatcagtggaatccatactcatgccgggcctggtggt
tatctgcagtatgtagtttatattgttacgtctcttgggtttgttcgccaatcatttgat
gtaattgtcaacggcattgagcagtgtattgttgaagctcacaacaacctccgccctggg
aaaatctatgtgaacaaaggtgacctccttgatgctggtgtgaatcgcagcccaagtgca
tatctgaataaccctcctgaggagagaagcaagtatcagtataatgttgacaaagaaatg
acccttataaagtttgtagatgatgaactgggtccagttgggagtttcaattggtttgca
actcatggaacatcgatgagtcgtacaaattcattgataagtggtgataacaaaggagca
gctgcacgttttatggaagattgggcagaacaaaatggtattccaaagcagggggctcat
gtaactaatgatggtttagaatctttgcacaagatatctggactgccgagaagagtctct
tcaataattcctgaaccaactgagataactgatgacttagttcaattggcatcatcctac
gaggcctcaggtggcaggcgattatcaggttcaagtatcaccaggcgcattagaagtact
caacaaaacaaacctaaatttgtttcggcattctgtcagtcaaactgtggagatgttagt
ccaaatgtcctgggaacattttgtatagacactggtcttccttgtgacttcaatcatagt
acgtgcaatgggaagaatgaactatgctatggacgaggcccaggatatcctgatgagttt
gaaagtacccgtatcattggcaataggcaatttctcaaggctgtagatctttttaattca
gcttctgaagaaatacaaggcagaattgattataggcatacttacctagatttctcgcaa
ctcgaagttaatgttcctacaagtacaggaggacaacaggtggtgaaaacatgtcctgca
gccatggggtttgcctttgctgctggaactaccgatggccctggagcttttgactttaag
caaggagatgtcaagggaaaccctttctggaggttggtaagaaacttacttaagacgcca
gggaaggagcaagttgaatgccaagctccaaaaccaatattgctagacacgggtgaaatg
aaggaaccatacgactgggcacctgcgatacttccaattcagatcataagaatcggacaa
atggttatcctgtgtgtccctggagaattcacaacgatggctggcaggcggctacgagat
gctgtcaaagaagtactaacaagtgacaacagtggtgaatttaatgatattcatgttgtt
cttgctgggttatcaaatacctattctcaatatatcacaacttttgaagaatatcagatc
caaagatatgagggagcatcaacgttgtatggccctcacaccctgagtgcctacatccag
gagtttcagaaacttgctacagccatggttgccaacaaagagatcccaacaaacttccag
cctccagacatgttggacaggcaaattggactgctcccaggcgtcatgtttgattcgacc
ccccctggtgtgaagtttggagatgtcagctcagatgttcctgcaagctcaaccttcagg
aagggcaatatagtgaatgctacattctattcagcctgcccaaggaatgaccttctcact
gacggcacctttgcacttgtcgagaagctagatggtagtgacaattgggtccctgcctat
gacgacgacgactggtcgctgcgtttcaagtggtcaaggcctgcgaagctaagtccaagg
agtttcgcgacgctggaatggacaattcctgaagatgccccatcaggtgtctacagattg
aggcatttcggtgcctctaagacgttgcttggttccatcagacattttacagggacctct
cgtgcattcgccgtgcgttag
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