Setaria viridis (green foxtail): 117857452
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Entry
117857452 CDS
T07951
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117857452
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117857452
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117857452
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
117857452
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117857452
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117857452
Prokaryotic type
117857452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
117857452
NCBI-ProteinID:
XP_034595998
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Position
5:complement(10385023..10392489)
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AA seq
741 aa
AA seq
DB search
MLVCLRRGLSLVRQHTPHFLPSPPLRPARLFLHHLPAADGMGESSAAGKDAKGKGKAKAK
APAAASALVVTRDDSYLEAVTQTRIRKFEEIQARQALERLNIGGELIKVTLPDGAIKEGK
KLITTPMDIAKEISSGLAASCLIAKVDETLWDMGRPLEGDCKLQLFKFDSNEGRDTFWHS
SAHILGESLERVYGCKLCIGPCTTRGEGFYYDAYYNDLTLNEEHFGIIESQAQKAVAEKQ
PFERIEVSRAEALEMFAENKFKVEIINELPEDKTITVYRCGPLVDLCRGPHIPNTSFVKA
FACLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHFLEEAKKRDHRTLGLAQELFF
FHPLSPGSCFFLPHGARVYNKLMDFMRQQYRDRGYQEVLSPNIYNMQLWETSGHAANYKE
NMFVFEIEKQEFGLKPMNCPGHCLMFNNRVRSYRELPLRMADFGVLHRNELSGALTGLTR
VRRFQQDDAHIFCREDQIKDEVKGVLEFINYVYEIFGFKYELELSTRPEKYLGDIETWNK
AEQQLTEALNEFGMPWQINEGDGAFYGPKIDIGVFDALKRKFQCATLQLDFQLPLRFKLS
YSAEDEAKIERPVMIHRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSVSSGSVEYA
KQVLARLHEAGFHVDIDMSDRTIQKKVREAQVAQFNYTLVVGAQEAETGNVSVRVRGSDG
LATMSLDGLITRFREEIAAFK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgtgcctccggcgaggcctctcgctcgtccggcagcacaccccccacttcctc
ccctcgccgcctctccgtcccgcccgcctcttcctccaccacctccccgccgccgacggg
atgggtgagagctctgcagccgggaaggacgcgaaggggaaggggaaggccaaggccaag
gctcccgccgcggcttcggccctggtcgtcacgcgcgacgactcctacctggaagccgtc
acgcagacgaggatccgcaagttcgaggagatccaggcaaggcaggccctcgagcggctc
aacatcggcggcgagcttatcaaggtaactctacctgatggcgctatcaaggaagggaag
aagctgataacaacgccaatggatattgctaaggagatatcaagtggattggcagctagt
tgtttgatagctaaagtggacgaaacactctgggatatggggaggccactggaaggtgac
tgtaaattgcaattgttcaagtttgatagcaatgaaggccgtgacaccttctggcactca
agtgctcatattcttggagagtctcttgagagagtatatggctgcaagctgtgcattggg
ccttgcactacaagaggagagggtttctactatgatgcttactacaatgatctgacattg
aatgaggagcactttggtatcattgaaagccaagctcaaaaggctgttgcggaaaagcag
ccatttgaacgcattgaggtcagcagggcagaagctcttgaaatgttcgctgaaaataaa
tttaaggttgaaatcattaatgagttgcccgaggacaagaccattacagtatatagatgt
ggtcctttagttgatctatgccgtggaccacacatcccgaatacttcattcgtcaaagct
ttcgcctgtctgaaggcgtcatcatcatattggagaggaaaagctgaccgcgaaagcctg
cagagagtatatggaatttctttccccgattctaaacgcctcaaggaatataaacatttc
ttagaggaggctaagaaacgtgatcataggacactagggctggcgcaggaactcttcttt
ttccatccacttagccctggaagctgcttcttccttccacatggtgctagggtatataac
aaactgatggactttatgcgacagcagtatagagatagaggataccaagaggtgttgagc
ccaaatatttacaatatgcaactttgggaaacttctggacatgctgcaaactacaaggag
aatatgttcgtttttgagattgagaaacaggagtttggactgaagccaatgaattgccct
ggccactgtctaatgtttaataatagagttcgttcatacagagagttgcctcttcgcatg
gctgattttggagttcttcatagaaacgagcttagtggtgcacttacaggtttgacacgt
gttaggagattccagcaggatgatgctcatatcttttgcagagaggaccaaatcaaggat
gaagttaagggtgttttggagttcatcaattatgtttatgagatatttggcttcaaatat
gagttggagttgtctacgaggccagagaagtatttaggtgacattgaaacctggaacaaa
gccgagcaacaactgacagaagccttgaatgaatttgggatgccatggcagattaatgaa
ggagatggtgctttctatggtcccaaaattgatattggtgtgtttgatgccctcaagagg
aaatttcaatgtgcaaccctacagctggattttcagctcccccttcgcttcaagctgagt
tactctgccgaggatgaagccaaaattgaaaggcctgtgatgatacacagggcaatccta
ggatctgttgaaaggatgtttgccattcttttggagcattacaatggtaaatggcccttg
tggctaagccctcgccaggccattgtttgctctgtatcttctggttcagtggaatatgca
aaacaggttcttgccaggctacatgaagctggttttcatgttgacattgacatgagtgac
agaacaatccaaaagaaggtacgggaagcccaagtagcccaattcaactacactcttgtt
gtaggtgctcaagaggcagagactggaaatgtatccgttagggtaagaggtagtgatggc
ctagccacgatgagtcttgatggtctcatcacacgtttcagggaggaaatagcagctttc
aaatga
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