Setaria viridis (green foxtail): 117857472
Help
Entry
117857472 CDS
T07951
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117857472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117857472
04147 Exosome [BR:
svs04147
]
117857472
04090 CD molecules [BR:
svs04090
]
117857472
Enzymes [BR:
svs01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117857472
Transporters [BR:
svs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117857472
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117857472
CD molecules [BR:
svs04090
]
Proteins
117857472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_22
AAA_16
Zeta_toxin
ABC_ATPase
AAA_30
DUF815
SRP54
Motif
Other DBs
NCBI-GeneID:
117857472
NCBI-ProteinID:
XP_034596033
LinkDB
All DBs
Position
1:27010300..27014200
Genome browser
AA seq
1136 aa
AA seq
DB search
MRARYLQAVLRQDVEYFDLRSGSASEVITGVSNDSIVVQDALAEKVPNFVMYVTMFAGSY
AVGFALLWRMTLVTLPSSLLLIVPGVAYGRALTDLARRIRAQYARPGAIAEQAVSSVRTV
YSFVAEKAAMARFAAALEESARLGLRQGLAKGVAIGSNGIAFAIYAFNIWYGGRLVMYHG
YPGGTVFVVSSLIVIGGVSLGSALSNVKYFSEATAASDRILEMIRRVPKIDSESDAGEEL
ANVAGEVEFRNVEFCYPSRPESPVLASFSLRVPAGHTVALVGHSGSGKSTAIALLERFYD
PSAGEVALDGVDIRRLRLKWLRAQMGLVSQEPAMFAMSVRENILFGEEDATDDEVIAAAK
AANAHNFISQLPQGYDTQVGERGAQMSGGQKQRIAIARAILRSPKILLLDEATSALDTES
ERIVQEALDVASRGRTTIVIAHRLSTIRNADGIAVVESGAVQELGSHSELIAKNGMYSSL
VHLQQTRDSSEADEVVGGTCRTSPSAGQCSINTSKMLSSASRSNWTLSTGDAGDGDGDSN
EKPKLPVPSLRRMLLLNAPEWKYALVGSLSAILTGGIQPVYAYCMGCTFSIYYSADHGEI
KHKTRLYALVFLGLVVISFLLNVGQHYSFGAMGEYLTKRIRERMLEKILTFEIGWFDQDD
YSSGAICSQLAKDANIVRSLVGDRIALVIQTVSMVFIAFTVGLIISWRLALVMIAMQPFI
IACSYARRVLLKRMSTKSTLAQSETSKIAADAVSNLRTITAFSSQGRILRLFGRAQEGPY
RESIRQSWFAGLGLGASVSLTVFSWALNYWYCGKLMAERLISVEAVFQTTMILVTTGRVI
ADACSMTTDIAKGADAVSSVFAILDRQTKIEPDDPKGYKPEKLTGEVEIVDVDFAYPSRP
DVTIFRGFSLSITAGKSTALVGQSGSGKSTIIGLVERFYDPLRGVVNVDGRDIRAYNLHA
LRRHIGLVSQEPTLFAGTIRENITLGVEAEAPASDAEVEAAARAANAHGFICGLKDGYGT
RCGDRGVQLSGGQKQRVAIARAILRNPAILLLDEATSALDGRSEKTVQEALDRVMVGRTS
VVVAHRLSTVRGCDAIAVLERGVVVEKGTHAALMARGSSGAYFGLVSLQRGGEKQG
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgcggtacctgcaggcggtgctccggcaggacgtggagtacttcgacctccgg
tccggctcggcgtcggaggtgatcaccggcgtctccaacgacagcatcgtcgtgcaggac
gcgctggccgagaaggtccccaacttcgtgatgtacgtcaccatgttcgccggcagctac
gccgtcgggttcgcgctgctgtggcggatgacgctggtgacgctgccgtcgtcgctcctc
ctcatcgtcccgggcgtcgcgtacgggcgcgccctcacggacctcgcgcgccggatcagg
gcgcagtacgcgcgcccgggcgccatcgccgagcaggccgtctcgtcggtgcgcaccgtg
tactcgttcgtggccgagaaggccgccatggcgcggttcgccgcggcgctcgaggagtcg
gcgcggctcgggctcaggcaggggctcgccaagggcgttgccattggcagcaacggcatc
gccttcgccatctacgccttcaacatctggtacggcggccgcctcgtcatgtaccacgga
taccccggcggcaccgtcttcgtcgtctcctccctcatcgtcatcggcggcgtgtcgctg
gggtcggcgctgtcgaacgtcaagtacttctcggaggcgacggcggcgtcggacaggatc
ctcgagatgatacggcgggtgcccaagattgattccgagagtgacgccggcgaggagctg
gccaacgttgccggcgaggtggagttcaggaacgtcgagttctgctacccgtcgcggccg
gagagccccgtcttggccagtttcagcctgcgggtgccggcggggcatacggtggcgctc
gtcggccacagcgggtccgggaaatcgacggcgatcgcgctgctggagcggttctacgac
ccgtcggccggggaggtggcgctcgacggcgtcgacatccggcggctgcgcctcaagtgg
ctgcgcgcgcagatggggctcgtcagccaggagcccgccatgttcgccatgtccgtgcgt
gagaacatactgttcggcgaggaggacgccacggatgacgaagtgatcgccgcggcgaag
gcggccaacgcccacaacttcatctcgcagctgccacagggctacgacacgcaggtgggc
gagcgaggagcacagatgtctggagggcagaagcaaagaattgccattgccagagcgatt
ctaaggtcacccaagatcttgctccttgatgaagccacgagcgctctcgacaccgagtcc
gagcgcatcgtgcaggaggcgcttgacgtggcctccaggggccggaccacgatcgtcatt
gcacatcgcctctccaccatccggaatgctgacggtatagccgtcgtggaatccggtgca
gtccaggagctaggctctcactctgagcttatcgccaagaatggcatgtactcgtctctt
gtccatcttcagcagaccagagattcgagtgaggccgacgaggttgttggcggaacttgc
cgcacatctcctagtgcagggcaatgcagcatcaacacgagcaagatgctctcttcagct
agcaggtcaaattggacattgtccacgggtgatgcaggagatggtgatggtgacagcaat
gagaagccaaagcttcctgtgccatccttacgaaggatgcttctcctcaacgcaccagag
tggaagtacgcactggtggggagcttgagcgcaatcctgaccgggggcatccagcctgtt
tacgcatactgcatggggtgcaccttttccatctactactcggcagatcatggcgagatc
aagcacaaaacaaggctgtacgcgctcgtttttctcggtcttgtggtgatctcattcttg
ctcaacgttggacagcattatagcttcggcgccatgggtgagtacctgaccaagaggatc
agggagcgaatgcttgaaaagatcctcacttttgagattggatggtttgatcaagatgac
tactctagcggcgccatatgctcgcagcttgccaaggacgccaacattgtgaggtcactc
gtgggcgaccgaatagccctggtgatccagacagtttccatggtgttcatcgccttcacc
gtgggtctcatcatctcctggcgcctggccctggtcatgatagcgatgcagccgttcatc
atcgcctgctcctacgcccggcgcgtcctgctgaagcgcatgtccacgaaatcgacactg
gcgcagtccgagaccagcaagatcgccgccgacgccgtctccaacctccgcaccatcacc
gccttctcgtcccagggccgcatcctccgcctcttcggccgagcccaggaagggccgtac
agggagagcatccggcagtcatggttcgcgggtctcgggctcggcgcctccgtgagcctc
acggtgttctcgtgggccctcaactactggtactgcggcaagcttatggccgagcggctc
atctccgtcgaggccgtcttccagaccaccatgatcttggtcaccacggggcgcgtgata
gcggacgcgtgcagcatgacgacggacatcgccaagggcgccgacgcggtgtcctcggtg
ttcgccatcctcgaccgccaaacgaagatcgagcccgacgatcccaaggggtacaagccg
gagaagctcaccggggaggtggagattgtagacgtcgatttcgcgtacccgtcgaggccg
gatgtcaccatcttcagaggattctccctgagcataacggcaggcaagtcgacggccctc
gtcgggcagagcggctccggcaagtcgaccatcatcgggctcgtagagcggttctacgac
ccgctcaggggcgtcgtgaacgtagacggtagggacatccgagcgtacaacctccacgcc
ctgcgccggcacatcgggctcgtcagccaggagccgacgctgttcgccggcaccatcagg
gagaacatcacgctgggggtcgaagcggaggcgccggcgagcgacgccgaggtcgaggcc
gcggcgagggccgccaacgcgcacggcttcatctgcggcctcaaggacgggtacggcacg
cggtgcggcgaccggggcgtccagctgtcggggggccagaagcagcgggtggcgatcgcg
cgcgccatcctccggaacccggcgatcctgctgctggacgaggccaccagcgcgctggac
gggcggtcggagaagactgtgcaggaggcgctggacagggtgatggtggggcggacgagc
gtggtggtggcgcacaggctcagcaccgtccgggggtgtgacgcgatcgccgtgctggag
agaggggttgtcgtggagaagggcacgcacgcggcgctcatggccagggggagctccggg
gcctactttgggttggtcagcttgcagcggggaggggagaagcagggctga
DBGET
integrated database retrieval system
