Setaria viridis (green foxtail): 117857551
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Entry
117857551 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117857551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117857551
03032 DNA replication proteins [BR:
svs03032
]
117857551
Spliceosome [BR:
svs03041
]
Complex A
U1 snRNP components
Sm proteins
117857551
U2 snRNP components
117857551
Complex B
U1 snRNP components
117857551
U4/U6.U5 tri-snRNP components
117857551
Complex C
U2 snRNP components
117857551
DNA replication proteins [BR:
svs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117857551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
EDRF1_N
Motif
Other DBs
NCBI-GeneID:
117857551
NCBI-ProteinID:
XP_034596165
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All DBs
Position
5:complement(46261136..46263209)
Genome browser
AA seq
104 aa
AA seq
DB search
MAEEANGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENV
REMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagccaatggaaagaaggaggaggaggaattcagcacgggccctctgtca
gtgctgatgatgagcgtcaagaacaatacccaggttcttatcaactgccggaacaacaag
aagttacttggtcgtgtgagggcatttgatcggcattgcaacatggttcttgagaatgtt
agggagatgtggactgaggtaccaaagacgggtaaaggcaagaagaaggctcttccggtg
aacaaagacagattcataagcaagatgttcctccgtggggattcagtcatcatcgttctc
aggaacccaaaatga
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