KEGG   Setaria viridis (green foxtail): 117857578
Entry
117857578         CDS       T07951                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117857578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:svs03041]
    117857578
Spliceosome [BR:svs03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117857578
 Complex B
    117857578
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 117857578
NCBI-ProteinID: XP_034596207
LinkDB
Position
5:complement(31932441..31935533)
AA seq 291 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTLVLVNMYQRPDMITP
GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED
QAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGRDL
RKKLFGRYRRPHRGRSRSPSPVHRRERRDRDDYRRGGGGGGRGHDDYRGGGGGGRGRGGG
GSRHERYDDGGRRRHGGSPPPRRARSPVRENSEERRAKIEQWNREREEKQG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcaatatttggtacagagaaagatagagtcaactgcccattt
tacttcaagattggggcttgtcgtcatggggatcgttgctcacgcatccataacaggcca
accatatcaccaactcttgtgctcgttaacatgtatcaacgccctgacatgatcacccct
ggggttgatgctcaaggccagccaattgatccccgcaagatgcaggagcattttgaagat
ttttacgaggatatttttgaggaactgagcaagtttggtgagattgagaacctcaatgtc
tgcgataaccttgctgatcacatgataggcaatgtctatgtccagttcagggaggaagac
caggcagctgcagctcatacagcccttcagggccgcttttactctggccgcccaattgtt
gttgatttctccccagtgactgattttcgtgaagcgacctgcaggcaatatgaggagaac
agctgcaatcgtggcggatattgcaatttcatgcatgtgaagcagattggtagggatctg
aggaaaaagctctttgggcgttacaggaggccacatagaggaaggagccgcagccctagc
ccagttcacaggagggagcgtcgtgaccgagatgattaccgccgcggcggtggtggcggt
ggccgtggccatgatgactaccgtggtggtggtggcggtggccgtggccgcgggggtgga
ggcagcaggcatgaaaggtacgatgatggagggaggcgcaggcatggtggcagcccccct
cccaggcgtgcaagaagcccggtcagggagaacagcgaggaacgcagggctaagattgag
cagtggaaccgcgaaagggaggaaaagcaagggtga

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