Setaria viridis (green foxtail): 117857612
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Entry
117857612 CDS
T07951
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7 isoform X1
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117857612
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117857612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_HPS5
WD40_RFWD3
PROPPIN
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Cytochrom_D1
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Peptidase_S46
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
117857612
NCBI-ProteinID:
XP_034596259
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Position
5:complement(3786986..3794274)
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AA seq
521 aa
AA seq
DB search
MAPARQDAEDELEMKVEKYARGKGADLKALKDKKLKGQLVVKEKLYGQSAKAAAKAEQWL
MPSEEGFLEPDGLEKTYRFPQESIVKEVDLLSSRKPFDMILPVLGPYTIEYTSNGRYMLV
GGRKGHLAMMDMLHIDLIKEFQVRETVRDVAFLHNEQLYAVAQKKYPYIYNRHGTEIHCL
KEHGKALKLQFLTKQFLLASINSFGQLHYQDVSTGEMVANYRTGLGRTDVMRVNSYNAVI
GLGHAGGKVTMWKPTSVKPLVTMLCHHGPVTAVAFDRGGHLMATAGVDRKIKIWDLRKYE
VVNSYAARAQSLDFSQKGLLACSNGSLVEIYRDFGGHDYRLYMKHRMMKGYQVGKVLFRP
YEDILGIGHSMGLSSILVPGSGEPNFDTFVANPMETTKQKREKEVHALMDKLLPDTIMLN
PNLIATVRAPKKKEKKTKKEIEEEMEEAIEAAKNTERKKKTKGRSKPSKRTRKKEEDVFR
AKRPFLDQSKEVDGRPDKKQRIGEDMELPKALQRFAKKPQS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggcgcggcaggacgctgaggacgagctggagatgaaggtggagaagtatgcg
cgggggaagggtgctgacttgaaggcgcttaaggacaagaagttgaaaggccagctcgtt
gtcaaagagaagctctatggccagtctgcgaaagctgctgcaaaggctgaacagtggctt
atgcctagtgaggagggtttcttagagcctgatggtttggagaagacatatagatttcca
caagaatcgattgtgaaggaggtggatcttttgagttcaagaaaaccattcgatatgatc
ttacctgtacttggtccttatactatagagtacacatcaaatggccgctacatgctagta
ggcggacgtaaaggtcatcttgctatgatggatatgctgcatattgatctcatcaaggaa
tttcaggtgagggaaactgttcgcgatgtggcattcttacataatgagcagctgtatgca
gtcgctcaaaaaaagtacccttacatatataatcgacatggtacagaaattcattgtctg
aaggaacatggcaaagcgttgaaactccagtttctgactaaacaattcctcttggcttca
ataaacagctttgggcagctgcactaccaagatgtgagcactggtgagatggttgcaaat
tataggacaggtctggggcgaactgatgttatgcgggtcaattcctataatgctgtcata
ggcctggggcatgctggtggcaaagttaccatgtggaagccaacaagtgtgaaacccctt
gtcaccatgctgtgccatcatggccctgtgactgctgttgcatttgacaggggtggtcat
cttatggcaacggcaggtgttgacaggaagataaaaatctgggacctgagaaagtatgag
gttgtaaattcttatgcagcacgtgcccaatccttggattttagccagaaggggcttttg
gcctgcagcaatggatctctagtagagatctacagggattttggtgggcatgactatagg
ctttacatgaagcacagaatgatgaagggctatcaggttgggaaagttttgttccggccc
tacgaagatattctggggattgggcactcgatgggcctgtcatccatccttgttccagga
tctggtgagccaaactttgatacctttgttgccaaccccatggaaactacaaagcagaag
cgggagaaggaggttcacgctcttatggacaagctcctgccggacactatcatgcttaat
ccaaacttgatagccactgtaagagctccgaagaagaaagagaagaagaccaagaaggag
attgaggaagagatggaagaggctattgaggctgccaagaacactgagcgcaagaagaag
accaagggcaggagcaagcccagcaagcggaccaggaagaaagaggaggatgttttcaga
gccaagaggcccttcttggatcaatcaaaggaggtcgatgggcgacctgacaagaagcag
cgtataggtgaagatatggaactcccaaaagccttgcagcggtttgccaagaaaccgcag
tcatga
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