Setaria viridis (green foxtail): 117857653
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Entry
117857653 CDS
T07951
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 6-like
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117857653
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117857653
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117857653
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117857653
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117857653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
117857653
NCBI-ProteinID:
XP_034596331
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All DBs
Position
5:24816170..24823966
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AA seq
478 aa
AA seq
DB search
MPTVSVKWQKEVFPGIEIDTTQPPIVFKSQLYTLTGVPPERQKIMVKGGILKDDADWSTL
GVKEGQKLMMIGTADEIVKAPEKGPVFVEDLPEEEQVVALGHSAGLYNLGNTCYMNSTLQ
CLHSVPELKSALLSYSDTARGNGVDQASHNLTLATRNTFGELDQSVRPVAPLQFLQTLRK
KYPQFAQQHNNVYMQQDAEECWTQLVYTLSQTLTSDASESAALSMKQLFGIDLVSRVHCA
ESGEESMETESVYSMKCHISQDVNHLHEGLKHGLKTELEKVSPALGRTAIYTRESRINEL
PRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYEFCSDELKQKLQAPRQMLRDAENA
KFGLKTQGKASSSKENEGSSSSAGDSSSMDIDKADPSVPKKQLTGVYDLVAVLTHKGRSA
DSGHYVGWVKQDNGKWIEFDDDNPNIRKEEDILKLSGGGDWHMAYICLYKARVAESKS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtaagcgtaaaatggcagaaggaggtctttccaggcatagagatcgacact
acccagccgcctattgttttcaagagtcagctgtacacactaactggtgtaccacctgaa
cgccaaaaaatcatggtgaagggtggaatattgaaggatgatgcagattggtctactttg
ggtgtgaaagagggtcaaaagttgatgatgataggtacagctgatgaaattgtgaaagct
ccagagaaaggtccagtgtttgttgaggatctaccagaagaagagcaagtggtcgcactg
gggcacagtgctggtctttataaccttgggaatacatgctacatgaattccacgttgcaa
tgtctgcattctgttccagagctgaagtcagcgctactaagctattcagatactgcaaga
ggtaatggtgttgaccaagcctctcataatttgactcttgcaactcgtaacacctttggt
gagcttgatcaaagtgtccgtcctgttgcacctctacaattcttgcagacactgcgtaaa
aaatacccacaatttgcccagcagcacaataatgtctacatgcaacaggatgcagaagaa
tgctggacacagcttgtgtatacactttctcaaactcttacatcagatgcaagtgaatct
gcagctctttcgatgaagcaactgtttgggatagaccttgtgagcagggtccactgtgca
gaaagtggtgaagagagcatggagacagagtcagtttattccatgaagtgtcatatatct
caagatgttaaccaccttcatgagggacttaagcatggcttgaaaacagaacttgagaaa
gtttcacctgcactgggtcgaactgcgatttatactagagagtcaagaataaatgagctg
cccaggtacttgactgtgcagttcgttcgtttcttttggaaaagggaatcgaaccaaaag
gcaaagattttacgaaaagttgattaccctctggaactggatgtttatgaattttgctca
gatgaactgaaacagaaactccaagctcctcgacagatgctgagagatgcagaaaatgca
aagtttggattgaaaacacaggggaaagctagcagctcaaaagaaaatgaggggtcatca
agtagtgctggggactcatccagcatggacattgacaaagctgatccttctgtaccaaag
aaacaattgactggtgtctacgatttggttgctgtcttgacacacaagggaagaagtgca
gactctggccactacgttggctgggttaagcaagataatggaaaatggatcgagtttgat
gatgacaacccaaacattcgcaaggaggaagacattttgaaactatctggtggaggagac
tggcacatggcttatatctgcctgtacaaagctcgtgtggccgaatcaaagagttaa
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