Setaria viridis (green foxtail): 117857761
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Entry
117857761 CDS
T07951
Name
(RefSeq) crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03440
Homologous recombination
svs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117857761
03460 Fanconi anemia pathway
117857761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117857761
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117857761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
HHH_8
Motif
Other DBs
NCBI-GeneID:
117857761
NCBI-ProteinID:
XP_034596505
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All DBs
Position
5:45343777..45348195
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AA seq
452 aa
AA seq
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MAPPAPMQHKVRLPENEEVARALHEKRLAMREQPAGFKEHLDRTFGKAYRNVCASTEPIR
TLKEFSKIKGVGPWLIRCMKGFFAESSQDLSPTKCNVAGENGKKPRGPKRCVPKKKTAAS
GSPGNEAPANLNCQNAQSLPPFLGTFELQSSGKTGSPEFNMLDKDPVLVDHSILAMPPRQ
SNEEFLEAYEVVLILDDRENFGSRSRKVASKKVADNISSQFNISVEVKRLPVGDGIWIAR
HRKLLTEYVLDFIVERKNVADLASSIRDNRYKDQKSRLQNCGLRKLIYLVEGDPNTSNGS
VASIKTACFTTEIFEGFDVLRTSGYTDTQRTYGYLTQSIVDYYSTNFSLAKSARICPTYD
EFEGKCRDLQKKTVSQIFALQLMQVPQVTEKVALAVVEFYPTLFSLARAYSMLEGDTRAQ
EEMLKNKSKVINAGASRNIFKLVWGDGCNLQA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcctgcgccgatgcagcacaaggtgcgcctgccggagaacgaggaggtcgcc
cgcgccctccacgagaagcggctggcgatgagggagcagccggccggtttcaaggagcac
ctggaccgcacgttcggcaaagcctaccgcaacgtctgcgcttccacggagccaatccgg
acgctcaaggagttctccaagatcaagggtgtggggccatggctcatacgttgcatgaaa
ggattctttgcggagtccagccaggatttatctcctacaaaatgtaatgtagcaggagag
aatgggaagaaaccaagaggaccaaagcgttgtgtgccaaagaagaagactgctgcttct
ggttctcctggcaacgaggctcctgctaacttgaactgtcagaatgctcagtctcttcct
ccattcctaggaacatttgagttgcaatcatctggtaaaacgggttctcctgaattcaat
atgctagacaaggaccccgtattagtggaccattctatactagccatgccacctcggcaa
tccaatgaagagtttcttgaagcttatgaagttgttttgatactggatgatcgagagaat
tttgggtctcgttcaagaaaagttgcttcaaaaaaagttgctgataacatttcttcacag
tttaatatatcggtagaggttaaacgtttgcctgtaggtgatggcatttggattgctcgt
cataggaaacttcttacagagtatgttctggatttcattgttgaaaggaaaaatgttgca
gacctagctagttcaattagagacaacagatacaaagatcagaaatcacggctgcagaat
tgtgggctaaggaagctcatatatcttgttgaaggtgatccaaacacttcgaacggatct
gtggcaagcattaaaacagcctgcttcaccactgagatttttgaaggatttgatgttctg
cggaccagtgggtataccgatacccagagaacatatggctatctaacacaatcaatagtt
gactactacagcacaaatttcagtcttgctaagagtgctcgtatttgcccaacctatgat
gagtttgagggaaagtgccgtgaccttcagaagaaaacagtgagccaaatatttgctctg
caacttatgcaggtgccacaagtaacagagaaagttgcgctggctgttgtagagttttat
ccaactcttttctcactcgcaagggcgtactctatgcttgaaggtgatacccgtgcccaa
gaggagatgctgaagaacaagagcaaggtgataaacgcaggagctagcagaaacatcttc
aagcttgtctggggtgatggatgtaatctccaggcctag
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