Setaria viridis (green foxtail): 117857800
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Entry
117857800 CDS
T07951
Name
(RefSeq) cytosolic isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00020
Citrate cycle (TCA cycle)
svs00480
Glutathione metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01210
2-Oxocarboxylic acid metabolism
svs01230
Biosynthesis of amino acids
svs04146
Peroxisome
Module
svs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
svs_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
117857800
09106 Metabolism of other amino acids
00480 Glutathione metabolism
117857800
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117857800
Enzymes [BR:
svs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
117857800
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GFIT
Motif
Pfam:
Iso_dh
DUF6766
Motif
Other DBs
NCBI-GeneID:
117857800
NCBI-ProteinID:
XP_034596557
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Position
5:complement(30890612..30894688)
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AA seq
412 aa
AA seq
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MAFEKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPFVDLDIKYYDLGILHRDATDDKVTV
EAAEATLKYNVAIKCATITPDETRVKEFNLKHMWKSPNGTIRNIINGTVFREPIICKNVP
RLVPGWTKPICIGRHAFGDQYRATDAVLKGPGKLKLVFEGKEEQIDLEVFNFTGAGGVAL
SMYNTDESIRAFAAASMTTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEADWKSKFE
AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDG
KTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLDFALKLE
AACVGTVESGKMTKDLALLVHGSANVTRSHYLNTEEFIEAVAAELRSRLAAN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgagaagatcaaggtcgccaaccccatcgtcgagatggacggcgatgagatg
accagggtattctggcagtctatcaaggataagcttatcttcccatttgtggacctggac
atcaagtactatgacttgggtattctacaccgtgatgcaactgatgacaaggtcacagtg
gaggctgcagaggctactctcaagtacaatgtggctattaagtgtgctaccattactcca
gatgaaactcgggttaaggagttcaacctgaagcacatgtggaagagcccaaatggcaca
attaggaacattataaatggcactgtcttcagagagccaattatatgcaaaaatgttcca
aggcttgttccaggatggactaagcccatttgcattggaaggcatgccttcggtgatcag
taccgggctactgatgcagttctaaaggggcctgggaagctcaagctagtgtttgaggga
aaggaagagcagattgatctggaggtgttcaacttcactggtgctggaggagttgccttg
tctatgtacaacactgatgagtcaattcgagcttttgctgcggcttctatgacaactgct
tatgagaagaaatggccactctaccttagcaccaaaaacacaatcctgaagaaatacgat
ggcaggtttaaggacatcttccaggaggtctacgaagcagactggaaatccaaattcgag
gctgctggaatatggtacgagcatcgtctgattgatgacatggttgcgtatgcgcttaag
agtgaaggaggctatgtgtgggcttgcaagaactacgatggagatgtgcagagtgatttc
ttggctcaaggttttggctcgctgggtttaatgacatcagtgttggtgtgccctgatgga
aaaaccattgaagctgaggctgctcatggcactgttacccgccatttccgtgttcaccag
aaaggaggtgaaaccagtacgaacagcattgcttcaatctttgcttggacaagaggactt
gcacacagggcaaagctcgatgacaatgctaggctactcgactttgcgctcaaactcgag
gctgcctgcgttggaactgtggagtctgggaagatgacaaaagatctggcacttcttgtt
catggatctgccaacgtcacgagaagccattacttgaacactgaagagttcattgaggct
gttgctgccgagctccgatcaagactggctgccaattga
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