Setaria viridis (green foxtail): 117857954
Help
Entry
117857954 CDS
T07951
Name
(RefSeq) kinetochore protein NDC80 homolog
KO
K11547
kinetochore protein NDC80
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117857954
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
KMN network proteins
NDC80 complex
117857954
NMS complex
117857954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc80_HEC
DUF5595
Motif
Other DBs
NCBI-GeneID:
117857954
NCBI-ProteinID:
XP_034596781
LinkDB
All DBs
Position
5:1718245..1723723
Genome browser
AA seq
651 aa
AA seq
DB search
MCCLSSLLRPFQTRYTIPNFARYHKGLSKKRTILQGLSRKNENSIPLPPLHSKNPKPPPK
ISRSAATMRRGGGGGGGAGRRLPKSSLALSALDATPALDSSAIPIRNLDSAFSRRDSDAA
SLCSSRPASSVGVGVGAGPNFSDRATQAAALRIVNGYLSPAVTLRGPLPAARDIQAALRL
LLERIDFPPNEATFEDDLIQALRLLGCPHKITRSALKAPGTPHSWPPLLSVLHWLTLFAQ
YSDADASSAAEAPPNDLLLYTTQGYCHFLSGDDDAVEALDEEYLSKARMDGEAAVAKVRA
LEKDVQELEAEVNKLTSGPLRREALEAQKEALTADVHKFEAVVKTWKTKIDERDEALVDL
EKELEAKVLDAQCTAAENQELLKKVDAQALNVRDMERMHREMLAIERDIANAENGKAALE
DKAWELDAKLVTKLEELEGLAEQCNQALKRLKPGIDFQYMINSKGSSPAEMLGPGYKTVL
KPALMAHAEENKRITVSNLAESVDLQKQLQGSAKILEEEKSNISTLQARHDKMVARLNLL
DGEITNDDSRCTAEARRMKDELEKKYNAIRSVEKEADEFLKNSEKRLQDAILKNDEETQA
AATELLQLLESIAEHKEFMEATIAQRRKELYEAADYIASLASKTSSPSPHV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgcctttcgtctctcctgcggcctttccaaactcgatacacgatacccaatttt
gccagatatcacaagggcctttccaagaaaagaacgatattacaagggctttcacgcaaa
aacgaaaactccattccactgccgccgctccattccaaaaatccaaaacctccccccaaa
atctcaagatccgcggcgaccatgcgccgtggtggcggcgggggcggcggcgccggccgg
cggctccccaagtcctccctggcgctctccgcgctcgatgccaccccggcgctggactcc
agcgccatccccatccgcaacctcgactccgccttctcccgccgcgactccgacgccgcc
agcctctgcagcagccgccccgcttcctccgtcggcgtgggcgtcggcgccggccccaac
ttctccgaccgggccacgcaggccgccgcgctccgcatcgtcaacggctacctctccccc
gccgtcacgctccgcgggccgctccccgccgcgcgtgacatccaggccgcgctccgcctc
ctcctcgagcgcatcgacttcccccccaatgaggccaccttcgaggacgacctcatccag
gccctccgcttgctgggatgcccccacaagatcacccgctccgcgctcaaggcccccggc
accccgcactcgtggccgccgctcctctccgtactgcactggctcaccctcttcgcccag
tactccgatgcggatgcctcttccgccgccgaagccccacccaacgacctgctgctctac
accacccagggctactgccacttcttgtcgggggacgacgacgctgtcgaagccctcgac
gaggagtacctctccaaagcccggatggacggtgaggctgccgttgcaaaagtccgtgct
ctggagaaggatgtgcaggaattggaggccgaggtgaataagctcacctctggtcccttg
cggcgggaggcactggaggcacagaaggaggccttaactgcagacgttcacaagtttgag
gcggtggtgaagacctggaaaactaagatcgacgaaagggacgaggcgttggtggatctg
gaaaaggagttggaggcaaaagtgttggatgcccaatgcactgctgctgaaaaccaggag
ctgctgaagaaggtggatgctcaggcgttgaatgtgagggatatggagagaatgcacagg
gagatgctggcgattgaacgtgacattgccaatgctgaaaatgggaaagcggcactggag
gataaggcctgggagcttgacgctaagctggttaccaagctcgaggagcttgagggactt
gccgagcaatgcaaccaagccctcaaaaggttgaaacctggtattgattttcagtacatg
ataaattcaaaaggatcctcacctgcggagatgctaggccctggttacaaaacagtattg
aaacctgcacttatggctcatgcagaggagaacaaaaggatcactgtctcaaatcttgca
gagtcagttgatctacaaaagcagttgcaaggaagtgctaaaatcctggaggaggaaaag
agtaatatttccactctccaggctagacatgacaagatggttgctcgtttgaatttgctg
gatggtgaaatcacaaatgatgactcaagatgcacagctgaggctagacgcatgaaagat
gagttggagaaaaagtacaatgcgataaggtcggtggaaaaggaggcagacgaatttttg
aagaattcagagaagaggcttcaagatgcaatactaaaaaatgatgaagaaactcaggca
gctgctaccgagttgctgcaacttcttgaatccatcgctgagcataaagagttcatggaa
gcaacgattgctcagaggaggaaggagctttatgaagctgcagattatatagcctctttg
gcatccaagacatcatcgcccagtcctcatgtctga
DBGET
integrated database retrieval system
