Setaria viridis (green foxtail): 117857978
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Entry
117857978 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117857978
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117857978
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117857978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-rbx1
Prok-RING_4
zf-RING_4
RING_XB3-XBAT31
Zn_ribbon_6
zf-Nse
zf-RING_10
Sina_RING
zf-RING_6
zf-RING_11
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117857978
NCBI-ProteinID:
XP_034596814
LinkDB
All DBs
Position
5:44103071..44106103
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AA seq
314 aa
AA seq
DB search
MRLLQTRCTDPRQPRLVSYLNRQKVGGQRKKPTSLLASSQPRTLVAPRGPDDEPDSFLCS
IGFGQACIFYCNTMNSPGAGRRIQKRRRTTTKSLSQLLDLNCPPAEGAEGGSPFSSLPVS
HNEASSSMTVQLNQASSSIPPATNEPHIGMHSCPIDVEAIDDDVVIYSSTSLPQARQQST
RRITVILDDDSDTNPEPAGDALDEHVNTLLSLGTNRRHEPPSATNTFPVISLVDTPEVNF
FKAPPEPVKEVPKEPKFTCPICMNELTEAASTVCGHIFCQKCIKAAIQAQKKCPTCRRTL
NKNQHHRVYLPTTE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcttgcagacccggtgcacggacccgcgtcagccgcgtctggtttcttattta
aatcgccaaaaggtcggcgggcagaggaaaaagcccactagtcttcttgccagctcgcag
ccgcgaaccctagtcgctccgcgcggcccagacgacgagcccgattcgttcctgtgttct
attggcttcggtcaagcctgtatcttttactgcaacactatgaactcccctggtgctgga
aggcggattcagaagaggcgacgaactacaacaaagtctctctcacagcttttggacctg
aactgtccccctgctgaaggggctgaggggggttcacctttcagcagtttgcctgtctca
cacaatgaggcttccagcagtatgactgtacaactcaaccaggcttccagtagtatccca
ccggctactaatgagccacacattggcatgcatagttgccccatcgatgttgaagccatc
gatgatgatgttgttatctattcttcaacatcgctccctcaagcaagacaacagtcgacc
aggcgtattactgtgatattagatgatgattctgatacaaacccagaaccagcaggggat
gctcttgatgagcatgtgaacacactgctatctctgggcaccaaccgcaggcatgagcct
ccaagtgcaactaacacttttcctgtaataagtttagtggacactccagaagtcaacttc
ttcaaggcaccccctgaacctgtgaaggaggtcccgaaggaaccaaagttcacctgcccg
atatgcatgaatgagctgacggaagcggcatccaccgtctgcggtcacattttctgccag
aagtgcatcaaggctgccattcaggctcagaagaagtgccctacctgccgaaggaccctt
aataagaaccagcaccaccgggtgtacctcccaacgacggagtaa
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