Setaria viridis (green foxtail): 117857983
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Entry
117857983 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117857983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117857983
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117857983
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117857983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
117857983
NCBI-ProteinID:
XP_034596820
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All DBs
Position
5:356931..359803
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AA seq
313 aa
AA seq
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MDVDCVSLPDAPAPAAADVDDAGHGLGTLLAAARAYPKGGANAGGVHELLECPVCTNSMF
PPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCRYYSLGCQEI
FPYYSKIKHEAQCSLRPYNCPYAGSECAAAGDIPYLVSHLRDDHKVDMHSGCTFNHRYVK
SNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDAKNYSYSLEV
GANGRKMVWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRITGRIWKEQ
QTPDGACIPNLCS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgactgcgtctcgctgcccgacgcccccgcccccgcggccgcggacgtggac
gatgccggccatggcctcggcacgctcctcgccgccgcccgggcctaccccaagggcggc
gccaacgccggcggggtgcacgagctgctcgagtgccccgtctgcaccaactccatgttc
ccgccgatccaccagtgccaaaatgggcatacgttgtgttccacttgcaaggctagagtg
cacaatcgttgccctacatgcagacaagagcttggtgatatcaggtgtttggcactggag
aaagtagccgagtcgcttgagcttccctgcaggtactactccttggggtgccaagaaatc
ttcccatactacagcaagataaaacacgaagcacaatgcagcctcagaccatataattgc
ccctacgctggttctgagtgtgccgcggctggcgacatcccttatcttgtttcccatttg
agggatgatcacaaggttgatatgcatagcggttgcacattcaaccacagatatgtcaaa
tcgaacccacgagaagttgaaaacgccacctggatgctgacggtgtttcactgctttggg
cagtatttctgcctgcactttgaggccttccagcttgggatggcaccagtatacatggcc
ttccttcgcttcatgggagacgagaacgacgcgaagaactacagctacagccttgaggtg
ggcgccaacggcaggaagatggtgtgggagggcacccccaggagcgtccgcgacagccac
cggaaggtgcgggacagccatgacggcctcatcatccagaggaacatggcgctgttcttc
tccggtggtgataggaaggagctgaagctcaggatcactggccggatctggaaagagcag
cagaccccggacggtgcgtgtatacccaatctgtgtagctaa
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