KEGG   Setaria viridis (green foxtail): 117858088
Entry
117858088         CDS       T07951                                 
Name
(RefSeq) ras-related protein Rab7 isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04144  Endocytosis
svs04145  Phagosome
svs04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:svs00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117858088
   04145 Phagosome
    117858088
   04148 Efferocytosis
    117858088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117858088
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svs04147]
    117858088
   04031 GTP-binding proteins [BR:svs04031]
    117858088
Membrane trafficking [BR:svs04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    117858088
Exosome [BR:svs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117858088
  Exosomal proteins of other body fluids (saliva and urine)
   117858088
  Exosomal proteins of colorectal cancer cells
   117858088
  Exosomal proteins of bladder cancer cells
   117858088
GTP-binding proteins [BR:svs04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    117858088
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_16 ATP_bind_1 Septin nSTAND3 AAA_22 AAA_7 cobW AAA_5 G-alpha NTPase_1 AAA_24 DAP3 Lyx_isomer PduV-EutP NACHT Sigma54_activat nSTAND1 MCM NB-ARC
Other DBs
NCBI-GeneID: 117858088
NCBI-ProteinID: XP_034596975
LinkDB
Position
5:complement(34436546..34441152)
AA seq 206 aa
MSTSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTL
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFP
FILLGNKIDVDGGKSRVVSEKKAMEWCASKGNIPYFETSAKEDYNVDNAFLSVAKLALEH
ERDQDIYFQAVADPVPETEPRSGCAC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcgacgtcgcggaggcgaaccctcctcaaggtcatcgtcctcggcgacagcggggtc
gggaagacgtctctgatgaaccaatatgtccacaaaaagttcagccagcagtacaaagct
acaattggtgcagatttcgtcacaaaggaggttctcattgaagacaggctagtcacgttg
cagatctgggacaccgcggggcaggagagattccagagtcttggtgttgcattctataga
ggggcagattgttgtgtgctcgtctatgatgtcaactctaacaggtcattcgatacactc
aacacgtggcatgatgagttcctcaaccaagctagcccatcagatcctaaaactttcccc
ttcatcttgcttggtaacaagatcgatgtagatggtggaaaaagcagagtggtttctgag
aagaaagcaatggagtggtgtgcttccaaaggcaacattccttactttgaaacttctgca
aaagaggactacaatgttgacaatgcattcctctctgttgccaagcttgctctagagcat
gaacgtgatcaggacatctacttccaggctgttgcggatccggtcccggagactgaaccg
agaagcggatgtgcatgctag

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