Setaria viridis (green foxtail): 117858099 Help Entry 117858099         CDS       T07951                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism svs  Setaria viridis (green foxtail) Pathway svs03018   RNA degradation Brite KEGG Orthology (KO) [BR:svs00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     117858099  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:svs03019]     117858099 Messenger RNA biogenesis [BR:svs03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      117858099   mRNA degradation factors    5'-3' decay     Decapping complex      117858099 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  117858099 NCBI-ProteinID:  XP_034596991 LinkDB All DBs Position 5:complement(843650..849753) Genome browser AA seq 829 aa AA seqDB search MPPTGEAPSGSMFLHQGHFGLEPPPAPAGTDDTRFDASQYAFFGNNVLEEVELGGLEDDN DSDAAFIGVIDVEHPLSSQGNALEAEDSSFSDVDDLANTFSKLRRDVNLPKHIGINNLGT SFSRESSAAADWTPEFESPLWPNQYVLDARQGQDGNDWWPPQHHSSHFADSRLQRTSSSP QQQEQQNCNEPVLGPRPSPLHRTSSYPHKEPQYNPAEAVPAPNAPYNSHHPPGGPPSSLP GQAHQMNMSSFNEFQMHMPAQSDAPLSQFPRGGTPPESLFGGNLGHMVSRGFPTNSNSSG PKNHMLNNGQIPGEIASIMPNLVPNHLQRPNAFMPPQMLPMRKQHGMLPIQQSPQHLSRT QAHMFGPQHPPQLMNRFDNFGMPEFSDPRAISYMHHGRQGPHFPLQGPEFGIMRMGNGRP RFRSKYMSTEELENISRIQHAATHINDPYIDDYYHQACLARRSVDARLKHHFCPTLILDP SSRARGKDEPHAYLKVDALGRLPFSSIRRPRPLLDVEPASTTDDNTLVSKSLDQEPMLAA RITIEDGLSLLLDIDDIDRLLQINQQQDGGLQLKNRRQSLLGQLAESLQLVDPLGPNKNT HLSANDDLVFLRIVSLPKGRKLLSRYINLMVPGSDLARIACMAVFRHLRFVFGNLPSDDG SAETVTKLANAVAACIRGMDLSGLSACLAAIVCSSDHPPLRPLGYAAGDGATVIIKSVLD RATELLTEQLAASNYSVPNRGLWQASFNAFFGLLTKYCISKFDSLVHTMHTASAIGRELP VELLRASLPHTDEQQRRILLEFAQRTVPATGHSSQRAPGGTMASETIPS NT seq 2490 nt NT seq  +upstreamnt  +downstreamnt atgccgcccaccggagaagctccttctggatccatgttcctgcaccaaggccactttggc ctggagccgccgccggcacctgctggtacagatgacactagatttgatgcatcacagtat gctttttttggcaacaatgtgctggaggaggttgaactaggtggattggaagatgataat gacagtgatgctgctttcatcggagtcattgatgtagaacacccactttcttctcaaggg aatgcactagaggccgaagatagttcattctcagatgttgatgatcttgcaaatacattc tcaaagctaagaagagatgtcaacctaccaaagcatattggaataaataacctgggtact tctttttcaagagaaagttctgctgctgctgactggactccggaatttgaatccccactc tggcccaatcagtatgtcctagatgcaaggcaagggcaggatggcaatgactggtggcct ccacaacatcattcttctcactttgctgattccagattgcagagaacatcctcatcccct cagcaacaggaacaacaaaattgtaatgagcctgttcttggaccaaggccatctcctttg caccggacatcctcatacccacacaaggaacctcaatacaatcctgctgaagccgttcct gctccaaatgcaccatataattcacaccatccacctggtggaccacccagctcattgcct ggacaagcgcatcagatgaacatgtcgtctttcaatgaatttcagatgcatatgcctgca caaagtgacgccccattgtcccagtttcctcgtggagggacacctccagagtcattattt ggtggaaacctgggtcatatggtttcaagaggcttcccaactaacagtaacagcagtgga ccaaaaaatcatatgttgaataatggacagattcctggggaaattgccagtatcatgcca aatttggtgccaaaccatctacaacgtccgaatgcattcatgccccctcaaatgctgcct atgcgcaaacagcatggcatgctccccattcagcagtctccacaacacttatcaagaact caggcacatatgtttggccctcagcatccaccacaattgatgaataggtttgataatttt gggatgcctgagttcagtgatccaagagcaatatcatatatgcaccatggaaggcaaggt ccccattttcctctccaaggccctgaatttggtatcatgaggatgggtaatgggaggcca aggtttagatccaagtatatgtccaccgaagaacttgaaaacatttcaagaatacagcat gctgccactcacataaatgatccatacattgatgattattaccatcaagcttgtctggcc agaagatctgtcgatgcaaggttgaagcaccacttctgcccaaccttgatattggatcca tcttctcgtgcacgcggcaaggatgagccacatgcatatcttaaggtcgatgcccttggg agactgccattttcttccatccggaggccacgtccacttcttgatgttgaaccagcttcg acaactgacgataacactcttgtttcaaagtctcttgatcaggaacctatgctagctgct aggatcacaattgaggatggcctctccttactacttgatatagatgatattgatcgcttg cttcaaattaatcagcagcaagatggtggtttacaacttaaaaacagaaggcagtctctg cttggtcagctggcagaatcactgcagttggttgatccgctaggtccaaataagaataca catctgtcagcaaatgatgatttggtatttcttcgcattgtttctctacccaagggtcgg aaactactttcacgctatatcaaccttatggttcctggtagtgatcttgctcggatagct tgcatggcagtgttccggcatctgaggtttgtgtttggcaatttgccctctgatgatgga tcagctgagacagtaactaaactagccaatgctgtagctgcatgtattcgtgggatggac ttaagtggccttagtgcttgtcttgcagcaattgtgtgctcgtcagatcatccacctctt cgaccccttggatatgctgctggtgatggtgccacagtcatcataaagtctgtcctagat agggcaacagagcttctcactgagcagcttgctgcatcaaattacagtgttccaaaccga ggcctatggcaagcatcgtttaatgcgttttttgggttgcttacaaagtactgcataagt aaatttgacagcctagttcatacaatgcacactgcatcagcgatagggagggaactgcca gttgagcttctgcgtgctagtcttcctcatacagatgagcaacagcgcagaatattactt gagttcgcccaacgtacggtgcctgccactggccatagttctcagagagcgcctggtgga accatggcatctgaaacaatcccaagttaa

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