Setaria viridis (green foxtail): 117858177
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Entry
117858177 CDS
T07951
Name
(RefSeq) RING-H2 finger protein ATL7
KO
K19039
E3 ubiquitin-protein ligase ATL7/58/59 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117858177
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117858177
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117858177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
CCDC8
zf-RING_16
DUF1272
zf_RING_Vps8
Prok-RING_4
zf-RING_4
RINGv
FANCL_C
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117858177
NCBI-ProteinID:
XP_034597091
LinkDB
All DBs
Position
1:complement(27616881..27619795)
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AA seq
251 aa
AA seq
DB search
MSCTSPDPPDYCSAESPELKLYQAFIFSVPVFFTFVLLLFFYLFYLRRRRANWQSLRMRT
DNLIRGDNPRLECGLKEEMREMLPVVIFKESFLIRETQCSVCLADYQPDERLQRIPPCGH
TFHINCIDHWLSKNTTCPLCRVSLLPAPKATSTDLDLEAQTAVEESLNVHHQEGLADGNT
PQEDQATEEGGAGGSQAEEPRSDMIESLTVRVVVEPQADAEGSNRAQPVVEPQADAEGSP
STTCQPVKAKK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtacctctccagatccaccggactactgctcagccgaatcgcctgagctcaag
ctgtaccaggccttcatcttctcggtgcctgtcttctttacattcgtcttgcttctcttc
ttctacctcttctacttgaggcggcgcagggccaattggcagtccttgaggatgaggaca
gataatttgatacggggagataaccccagactggagtgtggtttgaaggaggagatgcgg
gaaatgttgccggtggttatcttcaaagagagtttcttgatcagggagacacagtgctct
gtctgcctagcagactatcaaccagatgaacggcttcagcgaatacctccttgtggccat
acttttcatatcaattgcatcgaccattggctctctaaaaacaccacctgccccctttgt
cgagtctcactccttccagctcccaaagcaaccagcactgacctggatttggaagcacaa
actgccgtagaggaatctctgaatgtacaccatcaggagggccttgctgacggtaacaca
ccacaagaagatcaggcgaccgaagaaggtggagctggtggcagtcaggctgaagaacca
cgtagcgacatgatcgaatcgttgacggtcagggtagtcgttgagcctcaagctgatgct
gaagggtcaaaccgagcacaacctgtcgttgagcctcaagctgatgctgaagggtcaccg
agcacaacctgccagcccgtcaaagcaaagaaataa
DBGET
integrated database retrieval system