Setaria viridis (green foxtail): 117858192
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Entry
117858192 CDS
T07951
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117858192
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
117858192
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
117858192
NCBI-ProteinID:
XP_034597104
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Position
5:complement(3557677..3563392)
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AA seq
292 aa
AA seq
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MQGGVSGFQNAPVTRAVVVASGLLSVVFSVQRRARALGISYQDIITNFRLWKIFPAVFAF
QSTPELMFGLYLLYYFRVFERQIGSNKYSVFCLFTITVSSLLEILSLVILKDTNYISTLA
SGPYGLIFASFVPFFLDIPVTSRFRIFGVNFSDKSFIYLAGLQLLLSSWKRSLIPGIFGL
VAGSLYRLNVLGIRKMKIPQVISSFFARYFAPSPGSTSRPSRSLVGNTPSQTGRSVQNQS
STGFAPIVEPPESSVAMLVSMGFDGNDARQALMRARNDINVATNILLEAQSR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcggcgtctccggattccagaatgcgccggtgacgcgggcggtcgtcgtcgcc
agcggcctcctctccgtcgtcttcagcgtgcagcgccgggcccgcgccctcggcatctca
taccaggacattataacgaatttccgtttatggaagatattcccagctgtatttgctttt
caatcaacaccggagttaatgtttggactgtaccttctgtattacttccgcgtgtttgag
aggcagataggctctaacaaatactcggttttttgcttgttcactatcacagtgtcatca
cttcttgagatcctgtcattggttatcctgaaagatacaaactacatcagcactcttgca
tcaggaccttatggcctcatatttgcctcatttgttccattctttcttgatatcccggtc
acatcacgattccgtattttcggcgtaaatttcagcgacaaatcattcatttacctagct
ggtcttcagcttcttttatcttcttggaagcgctcccttattcctggtatatttggtctg
gttgctggctctctatatcgcctaaatgtgcttggcatccgcaaaatgaagatcccacag
gttatttcatcattctttgcaagatactttgccccttcaccaggaagtacatctcgtccc
tccagaagtcttgtcggaaacacaccatcccaaacaggccgttctgttcagaatcagtca
tcaactggatttgcacctatcgtggaacctccagagtcctctgttgctatgctggtctca
atgggctttgatggcaatgacgctagacaggcactgatgagagctagaaatgacatcaat
gtggcaacaaacatcctactggaagcacagtctcgttga
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