KEGG   Setaria viridis (green foxtail): 117858224
Entry
117858224         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K03504  DNA polymerase delta subunit 3
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03030  DNA replication
svs03410  Base excision repair
svs03420  Nucleotide excision repair
svs03430  Mismatch repair
svs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117858224
   03410 Base excision repair
    117858224
   03420 Nucleotide excision repair
    117858224
   03430 Mismatch repair
    117858224
   03440 Homologous recombination
    117858224
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:svs01009]
    117858224
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svs03032]
    117858224
   03400 DNA repair and recombination proteins [BR:svs03400]
    117858224
Protein phosphatases and associated proteins [BR:svs01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117858224
DNA replication proteins [BR:svs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    117858224
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      117858224
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     117858224
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 117858224
NCBI-ProteinID: XP_034597144
LinkDB
Position
5:12319007..12324096
AA seq 517 aa
MAGGAVDQSLLDLLPQIHALFSDPLRVISYKWLSRNFSVSSNDAKRLLQEFVDKNGADLQ
VIYSVSGWLKNNPQNYCVKLTSGPKLEEARQAFKDSCSVQVYSIQASIPKDTAVLWNPEF
VQAEELFNQPFDEENCLRDNRFCGVFNSFVKRTSSGKHVSSLPPKPVNGAAVAAQSKPSV
TPKEQSVTARQQDLPGVSSLKQGAGNKSEKDSFTVLDKAATAPVSKEPSIVAHANKNKAQ
NGKAMPGNGGSLANMWGRASAKPKPPATTNPAAVASVAATADAQICAKEEADADSSDDEQ
GLKYRRGSGNASNRKRRAVFDFSDDEEDDNIVSIASPELPKPQAPDPVTQTAEDTEADQK
NMENKEDIPSNVKGCSRGLDFELTSECKSKSVNTINYSGITLKEKSSDPPINDNKQDSTA
EPASTSPKRRKVLKTRIDERGREVTEVVWEGEASAGDKTEKNANTTTASRAAPSSKPQPA
ANADKSKAPSKAAGSKKPAKAGTGTKQGSIMSFFKKA
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgggaggggccgtggaccagtcgctgctcgacctgctgccccagatccacgccctc
ttctccgacccgcttcgtgtgatttcgtataaatggcttagtcggaacttctctgtatca
tcaaatgatgccaagaggttgcttcaggagtttgtcgacaaaaatggagccgacctccaa
gtgatttacagtgtgtcagggtggctgaagaataatccccaaaattattgtgtaaagctc
acttcaggcccaaaacttgaagaagcaagacaagcattcaaagattcttgttcggttcag
gtctacagtatccaggcatctattccaaaagatactgcggtactatggaatcctgaattt
gttcaggcagaagagcttttcaaccaaccttttgatgaagagaactgtttgagagataat
agattttgtggtgttttcaattcttttgtcaagcgaacatccagtgggaagcatgtgagc
tcattgccaccaaagcctgtaaatggtgctgcggtagctgcacagtcaaaacctagtgtt
accccaaaggagcagtctgttactgctcggcagcaggatttgcctggagtgtctagtcta
aagcagggagcaggcaataagtctgagaaggatagtttcacagtattagataaagctgcc
actgctcctgtttccaaagaaccatcaattgttgcccatgcaaacaaaaataaagctcag
aatggcaaggccatgcctggtaatggtggatcgctggctaacatgtggggccgtgcatca
gcaaaaccgaagcctccagctaccactaatcctgcagctgtagcaagtgttgcagctact
gctgatgcacaaatatgtgcaaaggaagaagcagatgctgatagcagtgatgacgaacag
ggactaaagtacaggaggggctctggcaatgcaagtaacagaaagagaagagcagttttt
gatttttcagatgatgaggaagatgacaatattgtaagcattgcatctcctgagctacca
aaaccgcaagccccagaccctgttacccaaactgctgaagacactgaagcagatcaaaag
aacatggaaaataaagaagatataccaagcaatgtgaaaggttgctcaagggggttggat
tttgagttaacttcagaatgtaaaagtaaaagtgtcaatactataaattattctgggatt
actttaaaagaaaagagcagtgatcctccaatcaatgacaataagcaggattccacagct
gagcctgcttccacctcaccgaagagaagaaaggttttgaagacacgtatagatgagcga
ggaagggaagttactgaggttgtctgggagggtgaagcttctgctggtgacaagacagag
aagaatgcgaacactactactgcgagcagggcggctccttcaagcaagccacagccagca
gcaaacgctgacaagagcaaagctccaagcaaagcagcaggcagcaagaaacctgcgaag
gccggcactggcaccaagcaagggagcatcatgtcattcttcaagaaggcataa

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