Setaria viridis (green foxtail): 117858252
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Entry
117858252 CDS
T07951
Name
(RefSeq) la-related protein 6A isoform X1
KO
K15191
La-related protein 7
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117858252
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
117858252
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
Motif
Other DBs
NCBI-GeneID:
117858252
NCBI-ProteinID:
XP_034597179
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All DBs
Position
5:complement(36623105..36628022)
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AA seq
416 aa
AA seq
DB search
MDGQAPPLLEAVAPEPLAVADELPPPPPLEVEDALPLGIDGQAPPLDGVSPDPLTVSDEV
QTPPSPTGEAEDALPVAPDAVNAAFSAVPDAGTGGVVLTDELRDQIVKQVEYYFSDENLP
TDEFLLKYVKKNKKGFVPIETIAYFRRMKKLVQDLSVIAAALRTSRNLVVSPDGKRVRRL
HPLPQNELKDPKKSTVLVENLPPDFSMESIQEKFGRVGKVVNITVNDPELVKESSTAKKP
AFILSSKVHALVEYEAVEAAEKAVTTLSDESNWRTGMKVRLISKGSAKHSKSSKENQDTV
SKKNNQNQHSKEDQQTSSEKNSIADSMESTKDKENLNSAFTTETEHQHQKQNPKGARKGR
YKGQGQIQQNTDKQGSSGSESLNRPIPGPRMPDGTRGFTMGRGRPLPLQKSERAEE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacggccaggctccacctctcctcgaggccgtcgcgcccgagccccttgcagtcgcc
gacgagctcccgccgccgccgcctctcgaggtggaggacgccctacccctcggtatagac
ggccaggctccgcctctcgacggtgtctcgccggatccccttaccgtgtccgacgaggtg
cagacgccgccttcgccgacgggcgaggcggaggacgccctgccagtcgcgcccgacgcc
gtcaacgctgccttttcggcggtccccgacgctggcaccggtggcgtcgtgctcaccgac
gagctccgcgaccagatcgtcaagcaggtggaatactatttcagtgatgagaatcttcct
accgatgagttcctgttgaaatatgtgaagaagaacaagaagggctttgttcctattgag
actatcgcatattttagaaggatgaagaaactcgttcaggacctctcagtaattgcagct
gcactcaggacatcacgaaacctggttgtaagtccagatgggaaaagggtcaggaggtta
catccattgccacagaatgaattaaaagatccaaagaaaagcacagttttggtggaaaat
ctacctccagacttctccatggagagtatacaggaaaaatttggtagagtcggcaaagtt
gtgaacataacagttaatgatccagaattagtgaaagaatcttcaaccgccaagaagcct
gcattcattttaagtagtaaggttcatgcccttgttgagtatgaagcagtggaggctgct
gagaaggctgttactaccttaagtgatgagagcaactggagaactgggatgaaagttagg
cttatctcaaagggatcagcaaagcatagcaaatcttcaaaagaaaatcaggatacagtt
tccaaaaagaacaatcagaatcagcattcaaaagaagaccagcaaacaagctcagaaaag
aacagcattgctgattcaatggagagtactaaggacaaggaaaatttgaactccgcattc
accactgagactgagcaccaacaccaaaagcaaaatcctaaaggtgcacgaaaaggccgg
tacaaaggtcaaggtcagattcagcaaaatacagacaaacaaggaagttctggttctgag
tcattaaacaggcctattcctggaccaagaatgccagatggaacaaggggctttacaatg
gggcgtggtagacctcttccactacagaagtctgagagggctgaagagtag
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