Setaria viridis (green foxtail): 117858290
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Entry
117858290 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X2
KO
K20285
Rab9 effector protein with kelch motifs
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117858290
Membrane trafficking [BR:
svs04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117858290
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
117858290
NCBI-ProteinID:
XP_034597226
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Position
5:complement(1841830..1846573)
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AA seq
627 aa
AA seq
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MERRRKAMWLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLHFSDVLTLNVETMAWS
SMATTGQRPGTRDSHGAALVGHRMLVFGGTNGGKKVNDLHVLDLRTGEWTRPQCKGAPPS
PRESHTVTVVGGDRLVVFGGSGEGEGNYLSDVHVLDVPTMTWSTPEVKGDYAPAPRDSHG
AVAVGGRLFVYGGDCGDRYHGEVDVLDVDTMAWSRFPVKGASPGVRAGHASISVGSKVYI
IGGVGDKQYYSDVWVLDVANRSWSQLEICGQQPQGRFSHTAVVMNTDIAIYGGCGEDERP
LNELLILQLGSEHPNGRYNISMCKVLSNHWSQEKRKFLRSETQKDASVSNGEMVQKPREA
EIEQRNPFLRGLENGHAKRRKTGEARPNEPESEQEEHSLSLSQHSSPSQSDQEQNGAHKL
SASPNTSISALQPFTRLNANGTLRAPGPGGANGTLRAPGPGGVSSRPLKTDQFLRTIAPH
RQEVQFLSSDHKPQPRPPGPPLIGAEVHGTIDGAFDSGYLMTAVVNGQLFRGVLFAPGPG
VTAPRPAVHHQILTSSAVPPQQRPLLAHAIPVHARPVPQATGFVLPDCAHHARQGGFPAK
AVKSEPERGNSDLHDVVLTLGGPGGGK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcggcggaaggcaatgtggctgtaccccaaggtggtcggcttcaacccgccg
gagaggtggggccactccgcctgcttcttcgagggggtcgtctacgtcttcgggggatgc
tgcggcggcctgcacttcagcgacgtcctgacgctgaacgtggagaccatggcgtggagc
tccatggccacgacagggcagcgcccaggcacgcgggacagccacggcgccgccctggtg
ggccaccggatgctcgtcttcggcggcaccaacggcggcaagaaggtgaacgacctccac
gtgttggacctgcgcaccggggagtggacccgcccgcagtgcaagggcgcgccgccgtcg
ccgcgggagagccacaccgtcaccgtcgtcggaggcgaccgcctcgtcgtcttcggcggg
agcggcgagggggaggggaactacctcagcgacgtgcacgtgctcgacgtgcccaccatg
acgtggtccacgccggaggtgaagggagactacgcccccgcgcccagggacagccacggc
gccgtcgccgtcggcggcaggctcttcgtctatggcggggactgcggcgaccggtaccac
ggcgaggtggacgtgctcgacgtcgacaccatggcgtggtcaaggtttccagtaaaggga
gcatctcctggtgtcagggcaggtcatgcatctatcagtgttggttctaaggtctatatt
attggaggagttggtgacaaacaatactacagtgatgtctgggttcttgatgttgcaaac
cgttcatggagtcagcttgagatatgtgggcagcaaccacagggacggttttctcataca
gcggtagtcatgaatactgacattgcaatctatgggggatgcggtgaagatgaacgtccc
ctgaatgagcttctcattctgcaattgggctccgagcatccaaatggccggtacaacatt
tcgatgtgcaaggttcttagcaaccattggagccaggagaagagaaaatttctgagatca
gaaactcagaaagatgcaagtgtgagcaatggagaaatggttcagaaacctcgagaagca
gaaattgagcaaagaaatccgttcttgcgtggccttgagaatggccatgcgaagcgaaga
aaaactggtgaagcccgcccaaatgaacccgagtcagagcaagaggagcactcactgtct
ctttcccaacattcttcaccgtcgcagtctgaccaggagcagaatggagctcacaagctt
tcagcctctccaaacacgtcgatttcagccctgcaaccattcacccgcctcaatgccaat
ggcacgctgagggctcctggacctggaggtgccaacggcacgctgagggctcctggacct
gggggtgtttcgtcgaggcctctgaagactgaccagtttctccgcaccattgcaccacat
cggcaggaagtgcagttcctttcctccgatcacaaaccacagccccggcctcccggtcct
cccctaattggcgcagaggttcatgggacgattgacggagcattcgactcagggtacctc
atgaccgctgtggtgaatggccaactcttcagaggcgttctctttgctcctggacctgga
gtgacggctccaagaccggcagtacaccaccagatcctgacgagctcggccgtgcctccc
cagcagcggccactgctggcgcacgccatcccggtccacgcccggccggtgccgcaggcg
acgggctttgtgctgccggactgcgcccaccacgcgcggcaaggagggttcccagcgaag
gccgtcaagtccgagccggagcggggcaacagcgacctgcacgacgttgtgctcacgctg
ggagggcccggagggggcaagtga
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