Setaria viridis (green foxtail): 117858304
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Entry
117858304 CDS
T07951
Name
(RefSeq) myosin-17-like isoform X1
KO
K10357
myosin V
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117858304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117858304
04131 Membrane trafficking [BR:
svs04131
]
117858304
03029 Mitochondrial biogenesis [BR:
svs03029
]
117858304
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
svs04812
]
117858304
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117858304
mRNA cycle factors
P-body specific factors
117858304
Membrane trafficking [BR:
svs04131
]
Others
Actin-binding proteins
Myosins
117858304
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117858304
Cytoskeleton proteins [BR:
svs04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117858304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
nSTAND3
AAA_16
AAA_22
CbiA
TSC22
Motif
Other DBs
NCBI-GeneID:
117858304
NCBI-ProteinID:
XP_034597241
LinkDB
All DBs
Position
5:31380443..31393395
Genome browser
AA seq
1529 aa
AA seq
DB search
MGTPVNIIVGSHVWVEDPTLAWIDGEVVSIKNNEVHVQTSNGKKVTTDRSKVFPKDMEAP
PGGVDDMTRLSYLHEPGVLQNLATRYELNEIYTYTGSILIAVNPFQRLPHLYDTHMMEQY
KGADFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKTGRISGAAIRTYLLE
RSRVCQINTPERNYHCFYFLCAAPPEDIQRYKLSDPRSFHYLNQSSCIEVDGINDAEEYL
ATRRAMDIVGINEEEQEAIFRVVAAVLHLGNIDFAKGTEIDSSVIKDDKSRFHLNTAAEL
LKCDSKNLEKTLITRVIVTPEEIITRTLDPASAIASRDALAKTVYSRLFDWIVEKINVSI
GQDPNSKQLIGVLDIYGFESFKVNSFEQLCINYTNEKLQQHFNQHVFKMEQEEYTREAIN
WSYIEFVDNQDVLDLIEKKGGLIALLDEACMFPRSTHETFAQKLYTTFKNNKRFAKPKLS
RTDFTVVHYAGDVTYQADQFLDKNKDYVVAEHQDLLNASSCPFVAGLFPPLPQETAKSSK
FSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNLLKPAIFENTNVIQQLRCGGVLEAIR
ISCAGYPTRKTFYEFVNRFGVLAPEVLEGSNDDKIACQKILEKMGLENYQIGKTKVFLRA
GQMADLDARRAEVLGRAARIIQRQICTYIAKKQFFKLKKSATQLQSFVRGTLARKLYECM
RREAAAVKIQKNMRRHRARESYLHLQAAAITLQTGLRAMSARKEFRFRKETKAAIHIQAR
WRCHRDYSHYKNLQGAALTYQCAWRQRLARRELRKLKMASRETGALKEAKDKLEKRVEEL
TWRLGLEKRLRTDLEEAKAQEITKLQETLHDMQLQVEEAKAMVVKEREAARKAIEEAPPV
IKETPVIVEDTEKINSLTAEVEQLKALLQNERQATEAAKREQAESERRNEELIKKFEGAE
KKIEQLQDTVQRLEEKATNMESENKVLRQQAVAISPTAKSLAAYPKSPFQLKTPENGNAL
NGEMKSSPDVTPISLNPKELEAEEKPQKSLNEKQQENQDLLIKCVSQDLGFSSGKPIAAC
LIYRCLLHWRSFEVERTGVFDRIIQTIGSAIESQDNNDKLAYWLSNSSTLLLLLQRTLKT
TGAAGLTPQRRRSSAASFGRVFSGMRASPQSAGRAFLGSRLIGGLGDLRQVEAKYPALLF
KQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGSRSQANALAQQTLIAH
WQSIVKILTNYLNILKANYVPSFLISKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK
AGLAELEQWCIYATEEYAGSSWEELKHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQ
LYRISTMYWDDKYGTHTVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFSVDDISKS
MTEIEVTDVDMPPLIRENSGFTFLHQRKD
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgggaactccagttaacatcatcgttggttctcatgtttgggtagaagacccaactcta
gcttggatagacggggaggttgttagcataaaaaacaatgaagtacatgtgcagacatcg
aatgggaaaaaggttaccacggacagatcaaaagtttttcctaaggacatggaagctcca
cctggaggagttgatgatatgacaagactgtcgtacttacatgaacctggtgttcttcag
aatcttgctacccgttatgaactgaatgaaatatatacttacactggcagcattttgatt
gctgtaaatccatttcaaagattgccacatctttatgatacccacatgatggagcaatac
aagggtgcagattttggggaattgagtccccatgtctttgctattgcggatgttgcttac
agggcaatgataaatgaagggaaaagcaactctatattggtcagtggtgaaagtggtgct
ggcaagactgagacaacgaagatgcttatgagatatctagcacacttaggtgggcgatct
ggagtagaaggacgtacagtagaacaacaagtcctagagtccaatccagttcttgaagct
tttggtaatgcaaaaactgtgcgaaacaacaactcaagtcgctttggcaagtttgttgag
atccaatttgacaagactggacggatctcaggagccgccatcagaacttacttgctggaa
agatcacgtgtgtgccaaattaataccccggaaagaaattatcattgcttttacttcctt
tgtgctgcaccacctgaggacattcagaggtataagctatctgatcctagatccttccat
tacctcaaccagtctagctgtatcgaggtggacggaattaatgacgccgaagagtattta
gcaacaagaagggccatggacatagttggaatcaatgaggaagagcaggaagctatattc
agggttgtagcagctgtacttcatcttggaaatatagattttgccaagggaacggaaatt
gattcatctgtaatcaaggatgataaatccaggttccaccttaatactgcagcagaactt
ttgaaatgcgattccaagaatctggaaaagactctgataacacgagtaatagtcacgccc
gaagaaattattactagaacacttgatcctgcttctgcaattgctagcagagatgcatta
gctaaaacagtatactcccgcttgttcgattggattgtggaaaaaattaatgtctcaatt
ggacaggaccctaactcaaaacaattgattggtgttcttgatatctatggttttgagagc
ttcaaagttaacagttttgaacagctatgtatcaattatacaaatgaaaagctgcaacaa
cattttaaccagcatgtgttcaaaatggaacaagaagagtataccagagaagcgataaac
tggagttacatcgagtttgttgataatcaagatgtcctagacttgatagagaagaaaggt
ggattgattgcacttctggatgaagcatgcatgtttcctagatcaacacatgagacattt
gcgcagaagttatatacaacatttaagaataacaagcggtttgccaaaccaaagctttca
cgcactgattttacagttgtccattatgctggcgatgtgacataccaagctgatcaattc
ttagacaagaacaaagattatgtagtggctgaacatcaggatctgctgaatgcttcttca
tgcccgtttgtagctggtttattccctccactccctcaggagactgcaaagtcttcaaaa
ttttcatccattggatcacgtttcaagctgcaacttcaatctctcatggaaactttgagc
tctactgaaccccactatattagatgtgtgaagccaaataatctcctcaagccagccatt
ttcgagaatacaaatgttatacagcaactacgatgtggaggtgttcttgaagctatcagg
atcagctgtgccggataccctacaagaaaaacattttatgaatttgtcaatcgttttggc
gtccttgctcctgaagttttagaagggagcaatgatgataagattgcttgccagaagatt
ttggaaaaaatgggtctggagaactaccagattggaaaaacaaaggtgtttctgagagct
ggacagatggctgatttggatgcacgtagagctgaagtattaggaagagcagcaaggatc
atacagagacaaatatgcacatatattgcaaagaaacagtttttcaagcttaagaaatca
gcaacacagctacaatcttttgtcagaggaaccttggctcgtaagctgtatgagtgcatg
aggcgggaagcagcagcagtgaaaatacaaaagaatatgcgtcgccacagagcacgagag
tcttatttacacctgcaagcagctgcaatcacactgcagacaggcttaagggcaatgtct
gctcgcaaagaattcagattcagaaaggaaacaaaagcagctatccacatccaagctcga
tggcgctgccacagagactactcacattacaagaatctgcaaggtgcagctcttacttac
cagtgtgcctggaggcaaagacttgcgagaagagagctcagaaagctcaagatggcctcg
agagaaacaggggcccttaaagaggccaaggataaacttgagaagcgtgttgaagagcta
acctggcgcttaggattggagaagcgattaaggactgaccttgaggaagcaaaagcccag
gaaattactaagctgcaagagacattgcatgacatgcagcttcaagttgaagaagcgaag
gccatggttgttaaggaaagagaagctgctagaaaggcaattgaagaagcacctccagta
attaaagagactcctgtcatagtcgaagacactgaaaagattaactcactgacagctgaa
gttgaacagctaaaggctttgctgcaaaatgaaaggcaagcaacagaagctgcaaaaaga
gaacaagctgaatctgaacggagaaatgaagaactaattaagaagtttgagggcgcagag
aaaaagattgagcaacttcaggacactgtccagaggctggaagagaaagcgaccaacatg
gaatctgagaacaaagtgctccgccaacaggctgttgcaatttctcctacggcaaaatca
ttagctgcatatcctaaatctcctttccagctgaaaactccggaaaatggaaatgctcta
aatggagaaatgaagtcatcgccagatgtcacccctatctcactaaaccccaaggagctt
gaagctgaagagaagccacaaaaatcacttaacgagaagcagcaggaaaatcaagacctg
ttgatcaagtgtgtatcacaagatctgggattctccagtggcaaacctattgcagcttgc
cttatctacaggtgtcttctacactggagatcatttgaagttgaaagaactggtgttttc
gaccgtattattcaaacaattggctctgctattgagtcccaggataataatgacaagttg
gcatattggctgtcaaattcatctacactactgctgctgctgcaacgaacactgaaaaca
actggagcagctggactcactcctcaaaggcgcagatcatctgctgcttcttttgggagg
gtgttttcggggatgcgagcctcacctcaaagcgctgggcgtgcttttctgggaagtcgc
ttgattggaggcctaggcgatcttcgtcaagttgaagccaagtatcctgccctgcttttc
aagcagcagcttacagctttcctagagaagatctatggaatgataagagacaacttgaag
aaggagatatctcctctgcttggcctttgcatccaggcaccaagaacatctcgcgcaagt
ctaattaaaggatcacgttctcaagcaaatgccttggctcagcaaactctgattgcccat
tggcagagcattgtgaagatattgacaaattatttgaacattttgaaagccaattatgta
ccttcattcttaatcagcaaagtgttcactcaaatcttttcatttattaacgttcagttg
tttaatagtttgcttcttcgacgggagtgctgttcatttagcaatggagaatatgtgaaa
gctgggttggcagaattagaacagtggtgcatttatgcgactgaagagtatgcaggttct
tcttgggaggaattaaaacatattaggcaggctgttggattcctcgtaatccatcaaaag
ccaaagaaaacgttgaaagaaatcaccaacgatttgtgccctgtccttagcatacaacag
ctatatcgaatcagtacaatgtattgggatgataagtacggtactcacaccgtttcctca
gatgtcatctcaagtatgagagtaatgatgaccgaagattctaataatgctgtgagcagt
tctttcttgttggacgatgattccagcattccattttccgtggatgacatctcgaaatcg
atgacagaaatcgaggtaacagatgttgatatgccacctttgatccgggagaactcaggg
tttacattcctacaccaaagaaaggactaa
DBGET
integrated database retrieval system
