Setaria viridis (green foxtail): 117858330
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Entry
117858330 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117858330
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117858330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
TPR_14
Motif
Other DBs
NCBI-GeneID:
117858330
NCBI-ProteinID:
XP_034597269
LinkDB
All DBs
Position
5:27087218..27109067
Genome browser
AA seq
2436 aa
AA seq
DB search
MAASEREAALLARVAANHLFLGQFEALRAALLSLRRRADPGLAADFLRAVVAAGGRVPGV
LWSAPPACPSPSHLAWLAALELAALPSTPNPEALRLKAEFLVLLQPIADDPAVGAEARET
LTRLLDLGVVRLRREVEGGGGEAVAIVEEAPVTEKDLRRLWGVFLDNALVLDALCVGISR
QIGLDGGFGADVLLWLRQNVQLAHLDSMKTLLAEDDLDGAAGHLRFLCLDHGVEEDDYKV
IISELFRKGWTKASNYGGRWSQLRDRITKMYGAALQSTSPQLVQLVQLILDDIVSEEIED
HNVSDANGMPLPFTKFVETLSLERGTDSDDRTLLDAAITSCKKDLYHYCRLSGKHMLEVV
LETALSSIKREQLQEAVDVVSLFPLLQPLVAVLGWDILKGKTALRRKLMQLFWTSKSQAL
RLQEYSNYRSQTDETSCEEYLCDLLCFHLDLACFVSSVNSGHPWNLRNSLLFPQQDQGSD
VNNAEILDPFVENLILERLAVQTPMRVLFDVVPGIKFQDAIELVGMQPLPSATAAWKRMH
DIELMHMRYSLQSVVLALGEMEKCAADGNECYYHKALSYLREMQNFVEAIKSTPRKIFMV
SIILSLLHMDDCVKLSQAVPSECYVTHECHESNIESEGKNMVIYFVGLLLDILSHNLQVK
GPDMDHLSSTSLSPAGRQALEWRLKHAKHSIEDLDWRLSVLKRLQPPSERQWSWKEALVL
LHAAPSKLLNVCMQRENYDIGEEAVQRFSLPAEDKASLELAEWVAGAYKRALVEDAVNRA
TNNNAGQELDILSLRAQLGSLTTILLCVDVAATSARSGDMCRFLLDEATSLLSEIFPGSS
PKEGAAYWDQIQELATISVIKRILQRLHDIVDLEPLPYLQVFFTEMSISSSTESSRVGQK
QRPLGLLHQMIDDAFKGKRQFLSGKLHNVARAIVDEDFDSVYAKEGVNLEKKDVLSSEKG
VVLGHGLRILKQASRSDLASSNVPESSSEHKGSTNRYMGPLSTKPSTYLSNFIIYIATIG
DIVDGTDTTHDFNYFSLVYEWPKDLLTRLVFERGSTDAAAKVADTMGADFVHEIISACVP
PVLPPRTGHGWACIPIIPILCNISSENRPCAIPKSLPPAQGWSAHDSSLSSRQEPLYPLQ
LNLVKHLAQLSSVRAVLACVFGSSILSGDNESSPTYVKDTTQAPEIERSFFEFALEQSER
YPTLNRWIQMQSNLHRVSESSVTDKSENEVSLHQSKGKFSMKRAREHDSDGESELDDIII
SGNATSGPLESPKHEDTRLEPTAFISFDWENEGPYEKAVERLITEGKLTDALAVSDRCLR
NGASDKLLQLLIEQKEDRSQGTGQIRAYGSHNLGSDTWQYCLRLRDKKLAVQLALKYLRS
WDLDPASNVLTMCMCHLTQNDPMRSEVLHMKQSLQRYGHIMSADDHYTRWQEVEADCEAD
PEGLALRLAAKGAVSAALEVAESASLSIDLRRELQGRQLVKLLTTDPLNGGGPAAASRFL
STLRDSNDALPVAIGAMKLLPDLRSKQLLVHFFLKRTVGSLSDAEIARLNSWALGLRVLS
LLPLPSQQRCSSLHEHPQLIVEVLLMMKQFQSASLILKEFPTLRDDRLIIAYAKKAISIN
VSSTPKERRPSISASRAKQKKATTPAKTNFVQSFGNFQREARKAFSWVPRDSGTKTPPKD
SLRKRKSSGSGGDRSSWDALPGVQEERTPVYPSEGQDKLPFVSAPDEWVLTGEPDKDDAT
RSSHRYETSPDITLFKALISLCTDESVAAKGALELCMTQMKIVLSSQQLPLDASMDNIAR
AYHATETYVQALSYAKNLLKKLIGSSDLSSGSERSRDVDDISVDTGSSSTGSQYQDELSD
LLAQADMWLGRAELLQSLLGSGIIASLDDIADKESSTSLRNRLVSDERYSMAVYTCRKCK
IDAFPVWIAWGHALVRMEHYAQARVKFKQALQQYKGDAATVVTEIINTIEGGPPVDVSSV
RSMYEHLAKSAATIFDDSLSADAYLNVLYMPSTFPRSESSRQSRDPIDNQFTSATSYLED
GPRSNLDSVRYAECIHYLQDYARPQILAFMFRHGHFSEACSLFFPFSQQTTEGETSLSSV
PWSDPLTTDYGTMDDLCDLCLGYGAMAVLENTIRAITQSPAYHETPVIQYMNTVLTRICN
YCETHRHFNYLYNFLVLKDDHVASGLCCIQLFMNSMSQEEALRHLGHAKTHFEEALSVRD
RTIEATKLVLRSARNKSTPGKMTRETIMKYSTRVSYQMDVVKALNSIDGPQWKTSLFGNP
TDPETLRRRCMVVETLAEKHFDLAFRMLHEFDLPAVDIYAGVAASLAERKKGGQLTEFLK
NIRGTIDDDEWDQVLGAAINVYANKHKERPDRLIDMLISNHRKVLACVVCGRLKSAFQIA
SRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtcggagcgggaggccgcgctcctcgcgcgcgtggccgcgaaccacctcttc
ctcgggcagttcgaggccctgcgcgcggcgctcctcagcctccgccgccgtgccgacccg
gggctcgccgcggacttcctccgcgcggtcgtcgccgcggggggccgcgtcccgggcgtg
ctctggtccgcgccccccgcctgcccgtccccgtcccacctcgcctggctcgccgcgctc
gagctcgccgccctcccctccacccccaaccccgaggcgctgcgcctcaaggccgagttc
ctcgtcctcctccagcccatcgccgacgaccccgccgttggcgccgaggccagggagacc
ctcacgaggctgcttgatttgggggtggtgaggctgaggcgcgaggtcgagggaggcgga
ggggaggccgttgctattgtcgaggaggcccctgtcaccgagaaggatctgaggaggctg
tggggggtgttcctcgataacgcccttgtgcttgacgcattgtgtgtgggcatatcgagg
cagatcggcttggacgggggtttcggcgcggacgtgctcctgtggctgcggcagaacgtg
cagcttgcccacttggactccatgaagacactccttgcagaggatgatcttgacggtgct
gctggtcatctccggtttctttgtcttgatcatggcgtggaggaggatgattacaaggtt
atcatatcagagcttttcagaaagggttggacaaaagcatccaattatggtggaaggtgg
tctcagttgcgggatagaataactaaaatgtacggcgcagctcttcagtctactagtccc
cagctggtgcaactcgttcagctcattctggatgacattgtttctgaagaaattgaagat
cataatgtctctgatgctaatgggatgcctctccctttcacaaaatttgtggaaacattg
tcattggagaggggtactgactcagatgacaggaccttgttggatgcagctataacatcc
tgcaagaaagatctctaccattattgtcgactctctggaaagcatatgcttgaagttgtc
ttggaaactgctttgtcatcaattaagagggagcagcttcaagaagctgttgatgttgtt
tcgttgttcccccttctccagccattggttgctgtcttggggtgggatattctgaagggt
aaaacagctctacggagaaagctaatgcagctgttctggacaagcaaatcccaagctcta
cgactacaggaatattcaaattaccgtagtcagacagatgagacatcctgcgaggagtac
ttgtgtgatcttttatgctttcatctggatcttgcatgttttgtttcaagtgtgaattct
ggccacccatggaatttgaggaattcgttattgtttccccaacaagatcaaggttcagat
gttaacaatgcagaaatattagacccttttgtcgagaacttgatacttgagcggctagct
gttcagactcccatgagagtgctatttgacgtagtcccaggaataaaatttcaagatgca
atcgagcttgttggtatgcagccacttccttcagcaactgcagcttggaagaggatgcat
gatattgaactgatgcacatgcgatattctcttcagtcagttgtgcttgctctaggagag
atggagaagtgtgcagctgatgggaatgagtgttattatcataaagcgttatcatatctg
agggagatgcaaaattttgtggaggctatcaaaagtactccaagaaagattttcatggtc
agcattatattatcattgttacatatggatgactgtgtgaaactgtctcaagcagtccct
tctgagtgctatgtcactcatgaatgccatgaaagtaatattgaatctgagggaaagaac
atggtgatatattttgttgggcttctacttgatatacttagtcataatctccaagtgaaa
ggccctgatatggatcacctgtccagtactagtctgtcacctgctggtaggcaagcatta
gaatggaggctcaaacatgccaaacattccattgaagacttagattggcgtctatctgtt
ctaaaacgccttcaacctccttccgagcggcaatggagttggaaggaggcattagttctt
ctacatgccgctccttcaaagttactaaatgtatgcatgcaaagggaaaactatgatata
ggagaagaagctgtacagagattttctttacccgccgaggataaagcctctcttgaacta
gctgaatgggtagctggcgcatataaaagagcattggttgaagatgcggtgaatcgtgct
accaataacaatgcgggacaggaattggatattttgtcattacgtgctcagcttggttct
ctaactacgattctactttgtgttgatgttgctgcaacatctgctaggtcaggtgatatg
tgccgatttcttcttgatgaggcaacaagcttgctatctgaaatatttccaggcagctcc
ccaaaagaaggcgcagcttactgggatcagatccaagaacttgctacgatatcagtgata
aagcgcatccttcagcgtctgcatgacatcgtggatctggaacctcttccatatcttcaa
gtgttttttaccgagatgagcatctcttcgtcaactgaatctagcagagttggacaaaag
caacgtcctcttgggcttcttcaccaaatgattgatgacgccttcaaaggaaagcggcaa
ttcttgagtggtaaacttcacaatgttgctagagctattgttgatgaagactttgatagt
gtttatgcaaaagaaggtgtcaacttagaaaagaaagatgttttgagttctgagaaaggt
gtagtccttggtcatgggcttaggatcctgaaacaagcatctaggagtgaccttgcatct
tcaaatgttccggaaagcagttcagaacacaaaggttctacaaatagatacatgggtcct
ctatctaccaagccatcaacatatttatcaaacttcataatatatattgcaaccattggt
gacatagtcgatggaactgacacgactcatgatttcaactacttctcattagtctacgaa
tggccaaaagatctattaactcgcttagtttttgagcgtggaagtactgatgcggctgca
aaggtagctgacacaatgggtgctgactttgtgcacgagattatatcagcatgtgtgcca
cctgttttacctccacgaacaggacatggatgggcttgcattcccattatacctatcctt
tgtaatattagttcagaaaacagaccatgcgccattccaaagtcccttcctcctgctcaa
ggatggagtgcacatgattcatcattgtcttctcgtcaagaacccctctatcctcttcag
ttaaatttggtgaagcatttagcccagttatcatcagttagagcagttttggcatgtgta
tttggaagtagcatactatctggtgacaatgaatcatctcctacttatgtgaaagataca
acacaagcccctgaaattgagagatcattttttgaatttgctctcgagcaatcagagaga
tatccaaccttgaaccggtggatacagatgcagtctaatcttcatcgagtatctgagtcg
tccgtgacagataaatctgaaaatgaagtctctttgcatcaatccaagggaaagttttct
atgaagcgagcccgcgagcatgatagtgatggtgaatcggagcttgacgatattataata
agcgggaacgctacttcaggtccgctagaatcccctaaacatgaagacactagactagag
ccaaccgcttttatttcatttgattgggagaatgaaggaccatatgaaaaagctgttgag
aggctaattactgaaggaaaactaactgatgctcttgctgtatctgatcgttgtttgcgc
aacggagcatctgataaattgcttcaattgctcatcgaacaaaaggaagacagaagtcag
ggcacaggacaaattcgtgcatatggatctcacaatcttgggagtgatacttggcagtac
tgcttgaggctaagagacaaaaaacttgcagttcagcttgctctaaagtatctgcgcagt
tgggaccttgatcccgcctctaatgtccttactatgtgcatgtgccacttaactcagaat
gatcccatgcggagtgaggtgctgcacatgaagcaatctttacagcgttatggtcatatt
atgagtgctgatgaccactacaccagatggcaagaggttgaagccgattgtgaagctgat
ccagagggcttggcactccgtcttgctgccaaaggagctgtttccgctgctttagaggtt
gctgaaagtgcctctttatcaattgatttgcggagagagttgcaaggccgccagcttgtc
aaactgctaaccactgatccacttaatggtggaggtccagccgcagcttcaagatttctg
tcaaccttaagagattccaatgacgctcttcctgtagccattggtgctatgaagctattg
cctgacttgcgttcaaagcagcttcttgtacattttttcctcaagcgtacagttgggagt
ctatcagatgctgagattgcacggcttaattcatgggcattaggtcttcgtgttctttcc
ttattgccattgccatcgcaacagcgttgctcttctcttcatgaacaccctcagttgatc
gtagaagtactattgatgatgaaacaattccagtctgcttctttgattttgaaagaattt
cctacactgagggatgataggttaattattgcttatgccaagaaagcaatctccattaat
gtcagttcaactcccaaggaacgtcgaccgagcatctctgcatcaagagcaaaacaaaaa
aaggccaccactccagctaaaacaaattttgtgcagagttttggtaacttccagagagaa
gcacggaaagcattctcgtgggtcccccgtgacagtggcactaaaacacccccaaaagat
agccttcggaaaagaaaaagttcaggttcaggaggtgatagatcctcttgggatgcattg
cctggtgtacaggaggagcgcacacctgtatatccttcagaggggcaagataaacttcct
ttcgtctctgctcctgatgagtgggtgttgacgggagaacctgacaaggatgacgcaact
cgttcatctcatagatatgaaacctctcctgacatcacactgttcaaggcattaatttcc
ttgtgcactgatgagtcagtagctgcaaaaggtgcacttgaactgtgtatgactcagatg
aagattgtgcttagctcccaacaattgccccttgatgcctctatggataacatagctcga
gcttatcatgcgacggaaacttatgtacaggccctctcttatgcaaaaaatctacttaag
aagctcattgggagtagtgatttgtcaagtggttctgaaagaagtagggatgttgatgat
atttctgtggacactggcagttcaagcactgggagccagtatcaagatgagctgtctgat
ctcctggctcaagcagacatgtggttggggcgcgcagagcttcttcaaagcctgttggga
tcaggtattattgcctcgcttgatgatatcgctgacaaagaatcttcaactagtctacgt
aacagattggtcagtgatgaacggtacagcatggctgtatatacttgtagaaagtgcaag
attgacgcttttccagtatggattgcctggggccatgctttagtacgaatggagcactat
gctcaagcccgagtgaagttcaagcaagcacttcaacagtacaaaggagatgcagctact
gttgttactgaaatcatcaacacaattgaaggagggcctccggttgatgtttcttctgtc
cgttccatgtatgagcatttggcaaagagcgcggcaaccatctttgatgattccctttct
gctgatgcttatcttaatgttctgtacatgccatccacatttccacgatctgagagctcc
cgacagtccagagatcctatagacaaccaattcacatctgctacctcataccttgaagat
ggtcctcgcagcaatcttgacagtgtccgatatgccgagtgtattcattacttgcaagat
tatgctcggccacaaattcttgctttcatgttcaggcatggccatttctctgaagcctgc
tctctgttcttcccttttagtcaacagaccactgaaggggaaacttctttgtcttcagtt
ccatggagtgatccgttaacaactgactatgggacaatggatgacttgtgtgatctatgt
cttggatatggtgctatggctgttctggagaacacaatacgggcaataacacaatcgccg
gcatatcatgagacacctgtgatccagtacatgaacactgttcttacccgcatttgcaac
tattgtgaaacacatcggcattttaattatctctacaactttttggttctaaaagatgac
catgttgcttctggcctttgttgtatccaattatttatgaattcaatgtctcaagaggag
gctttgaggcatttgggacatgccaagacacattttgaagaagccttatctgtacgagat
agaacaattgaggctacaaagttggtattgcggtctgctcggaataagagcaccccagga
aaaatgaccagagaaacaataatgaagtattctactcgtgtttcctatcagatggatgtt
gtgaaggctctcaacagtatagatggtcctcagtggaaaacttcccttttcgggaatcca
actgaccctgaaactctgaggcgaaggtgcatggttgttgaaactctggctgaaaagcat
tttgatttagctttcagaatgcttcatgagtttgatctcccagctgttgatatttatgct
ggtgtagctgcatcccttgctgaaaggaaaaaaggtggccaattaacagaatttttgaag
aacataaggggaactatagatgatgatgaatgggatcaggttcttggtgctgctataaat
gtttatgcgaacaagcataaagaaagaccagaccgccttattgacatgctaatcagcaat
cacaggaaagtacttgcttgtgttgtctgtgggcgtctaaaaagtgcattccaaatagct
tcacgaagtggaagtgttgctgatgttcaatatgttgctcatcaggcgttacatgcaaat
gcactgccggttcttgatatgtgtaagcaatggctggctcagtacatgtga
DBGET
integrated database retrieval system
