Setaria viridis (green foxtail): 117858332
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Entry
117858332 CDS
T07951
Name
(RefSeq) chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic
KO
K27711
chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117858332
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117858332
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Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-GeneID:
117858332
NCBI-ProteinID:
XP_034597276
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Position
5:complement(7083411..7088063)
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AA seq
256 aa
AA seq
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MSLLAAATPTTSAHFSAPLLPSSHTHRRAVAAPLRRTRRPRLATVVASVPDPAAGPVEYT
PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAREEGITMNTIQSKSLLGVGSIGEVPVLLVK
PQSYMNYSGEAIGPLAAYYQVPLRHILLVYDDMSLPNGVLRLQRKGGHGRHNGLQNVIEH
LDGRREFPRLSIGIGSPPGKMDTRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG
SIERFNLVQKYKFHRV
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctcgccgcagccactcccaccacctccgctcacttctccgcacccctcctc
ccctcctcccacacgcaccgccgggccgtcgccgccccactccgccgcacccgccgtcct
cgcctggccaccgtcgtcgcctccgtccccgaccccgccgcggggccggtggagtacacg
ccctggctcatcgctggcctcggaaacccaggcaacaagtactacggcacgcggcacaat
gtggggtttgagatggtggatcgcatcgcgcgggaggaggggatcacgatgaacacaatc
cagtccaagtcgctgctgggagtaggttcaattggcgaggtgccagtcttgctggtaaaa
ccgcaatcatacatgaactacagtggggaggcaattggacctcttgcagcctattatcaa
gtaccactacgacacatcctcttggtttatgatgacatgagtctgcccaatggagtacta
aggcttcaaaggaaaggtggtcatggtcgccacaatgggttacagaatgtgattgagcat
ttggatggccgccgggagtttcctcgtttatctattggcattggtagcccacccggaaaa
atggacacacgagctttccttctgcagaagttcagttcagaggaacgagtgcagattgac
actgctctggagcaaggggtggacgctgtgaggacccttgtgcttaagggttttagcggg
agtattgaaagattcaacctggtgcagaagtataagttccacagggtttga
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