KEGG   Setaria viridis (green foxtail): 117858349
Entry
117858349         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117858349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117858349
Enzymes [BR:svs01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117858349
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    117858349
SSDB
Motif
Pfam: Sina_ZnF Sina_RING zf-TRAF
Other DBs
NCBI-GeneID: 117858349
NCBI-ProteinID: XP_034597296
LinkDB
Position
5:6516301..6517883
AA seq 334 aa
MSEQQKRVSTPENGHGGKRPRALASPDGGVKQERRGQAEASQGGEGEGAVVAVQAMDDPQ
ISVRISVARLHCNACLVPLKPPTFKCEAGHVVCSTCRGRHGQGCAGAGAYAACVELDDIV
RDAKVPCAYEEYGCTSWVVYHKVVDHHRTCRWGPCFCPDSSCELYASPARLAEHFAAHHA
WPVAKIAYGKPCKLAVPGPQGRQVLVGEGDGCVFLVSPCALGAATAVSLVCVRAGGDAVA
GAPQFRCKLWVEVEGNKENLALVTSMVASSNLSGGFVAAEQGMFLAVPPELLHDESGEAP
ALMVRIDRAGAAAAAASARSPSATPPSKLPKRLQ
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgtctgagcagcagaagagggtttccacgccggagaacggccacggcggcaagaggccg
agggcgctggcctcaccggacggcggggtcaagcaggagcggcgagggcaagcggaggcg
agccagggcggcgagggagagggagccgtggtggccgtgcaggccatggacgatccgcag
atcagcgtcaggatctccgtcgcccgtctccactgcaacgcctgcctcgtccctctcaag
ccccccaccttcaagtgcgaggcagggcacgtcgtgtgctccacctgccgtggcagacac
ggccagggctgcgccggcgccggcgcctacgccgcctgcgtcgagctggacgacatcgtg
cgcgacgccaaggtgccctgcgcctacgaggagtacgggtgcacgagctgggtcgtctac
cacaaggtggtggaccatcaccgcacctgccgctgggggccctgcttctgcccggactcc
agctgcgagctctacgcctcgccggcgaggctggccgagcacttcgccgcccaccacgcc
tggcccgtcgccaagatcgcctacgggaagccgtgcaagctcgccgtcccggggccccag
ggcaggcaggtcctcgtcggcgagggcgacgggtgcgtgttcctggtgtccccgtgcgcg
ctcggcgcggccacggccgtgtcgctggtgtgcgtgagggcgggcggcgacgcggtggcg
ggggcgccccagttccgctgcaagctctgggtggaggtcgagggcaacaaggagaacctg
gcgctggtcacgtccatggtggccagcagcaacctgtccggcgggttcgtggcggcggag
cagggcatgttcctggcggtgccgccggagctgcttcacgacgagtccggcgaggcgccc
gccctcatggtccgcatcgacagggccggcgcagccgctgccgctgccagtgccaggtcc
ccgtccgccacgccgccgtcgaagctccccaagaggctgcagtaa

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