Setaria viridis (green foxtail): 117858381
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Entry
117858381 CDS
T07951
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117858381
04120 Ubiquitin mediated proteolysis
117858381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117858381
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Cullin
117858381
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF5903
Motif
Other DBs
NCBI-GeneID:
117858381
NCBI-ProteinID:
XP_034597330
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All DBs
Position
5:16400692..16405844
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AA seq
750 aa
AA seq
DB search
MSLNRPIIDLDEGWAQMEIGIAKLKRILADEPRVSFVSDEYMHLYTTIYNMCTQKSPHDY
SQQLYDKYRGAFDDYVTFTVLPSLREKHGEFLLRELVLRWKNHKVMVRWLCRFFHYLDRY
FITRRSLPPLKSVGWESFKTLAFDELKATVTTILITMVDKDRDGQIIDRTLVKNVLDIYI
ELGHDPARNQSAPDPPYEKDFEDAFRQGTIDYYSKKAQTWIVEDTCPEYMLKAEMCLQKE
KERVAHYLHSSTEPKLMEAAQGELLARHIDQILKKENSGCKVLLCNEKVEDLSRMFRLFS
RIKDGLPPVSKTFQEHVNEVGMSLLKQAVDAAASKKNEKRDVVSALELDYVRKILDLHDK
YMAYVINSFQNHTLFHKALKEAFEVVCNKDVAGCTSAELFASYCDSILRKGGIEKLSDEA
IEGNLEKVVKLLSYISDKDLFVEFHRKKLGRRLLFDKNGNDELERSLLAKLKQYFGGQFT
SKMEGMLTDIILAKDNQTKYEKYISRNPELHPSVDLSVQVLTTGYWPTYKSSEINLPSEM
VKCVEVFKGFYQSVTKYRKMNWIYSLGNCNIIGRFELKPIELIVTTYQGALLLLFNESER
LSFSEIVTQLNLSEDDTVRVLHSLSCGKYKILNKEPNSRTISPNDVFEFNHKFTDKMRRI
KVQLPPSDEKKKVIDDVNKDRRFAIDAALVRIMKSRKIMTHQNLVAECVEQLSRMFKPDI
KMIKRRIEDLITREYLERDKDSANSYRYLA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcaaccgcccgatcatagacctcgatgaggggtgggcacagatggaaatcggc
atcgccaagctcaagcgcatcctcgccgacgaaccccgcgtcagcttcgtctccgatgag
tacatgcacctctacacgacgatatacaacatgtgcacgcagaagtcgccgcacgactac
tcgcagcagctctacgacaagtacaggggggccttcgacgattacgtcacattcaccgtg
ttgccctccttgagggagaagcacggtgagttcctgctgagggaactcgtgctcaggtgg
aaaaaccacaaggtaatggtcaggtggctgtgcaggttcttccactaccttgaccgctac
ttcattacacggaggtcacttccgccccttaaatcagttggctgggaatccttcaaaact
ctggcctttgacgagctgaaagcaacagttacaacaattttgatcaccatggtcgacaag
gatagagacggccagattatagaccgtactcttgtcaagaatgttcttgatatctatatt
gaactcgggcatgacccagcaagaaatcaatctgcaccagatccaccttacgagaaggac
ttcgaagatgcatttcggcagggtacaatagattactattctaagaaggcccaaacctgg
attgtggaggacacttgccctgaatacatgcttaaggctgagatgtgcttacaaaaagag
aaggaacgagttgcacattatttacactcttctactgaaccaaagttaatggaggctgca
caaggagaattgctagctcggcacatagaccaaatcttgaagaaagagaattctggatgc
aaagtgttgctttgtaatgaaaaggttgaagatctgtcaaggatgtttaggctcttctct
aggataaaagatggcctgcctccagtatctaaaacattccaggagcatgtcaatgaagta
ggcatgtctttgttgaagcaagcagtagatgctgctgccagcaagaagaacgagaagagg
gacgtagtgagtgcgctggagctggactacgtgcggaaaatcctggatctccatgacaaa
tacatggcatatgtcatcaacagtttccagaaccatacactatttcacaaggcacttaag
gaggcctttgaagttgtttgcaataaagatgtcgctggttgcactagtgcggagttattc
gcatcatactgtgacagtattcttagaaaaggtggaatcgaaaaacttagtgatgaagca
attgaagggaaccttgaaaaggttgtgaagcttctttcatacatcagcgataaggacctc
tttgttgagtttcataggaagaagctaggaaggaggttgctctttgataagaatggcaat
gatgaactagagagaagcttgcttgccaagctaaagcagtattttggagggcagtttact
tcaaaaatggagggcatgctcactgatattattcttgcaaaagataatcaaacaaaatat
gaaaaatacatcagcaggaacccggagttgcatccttcggtagatctgagtgttcaggtt
ttgacgacaggatattggccaacatacaaaagcagtgaaataaatctcccttcagagatg
gttaagtgtgtggaggtgttcaaggggttttatcaatcagtcacgaaataccgcaagatg
aactggatttattccttgggaaattgcaacataattgggaggtttgaattgaaacccatt
gagctgattgttacaacttatcagggggcactgctattgctattcaatgaatccgagaga
ctaagtttctctgagattgtgacacaactaaatctttctgaagatgatactgtacgcgtg
cttcattcactttcatgtggaaagtacaagattctcaacaaagagccaaatagcagaaca
atttccccaaatgatgtctttgagttcaaccacaaatttactgataagatgcgaaggata
aaggttcaacttcctccctccgacgagaagaaaaaggtcatcgatgatgtgaacaaagac
aggaggtttgcaattgacgcagcactagtgcgaatcatgaagagccgcaagatcatgacc
catcagaatcttgttgcggaatgcgtggaacagctcagccgcatgttcaagcctgacatc
aaaatgatcaagagaaggatcgaggaccttatcacgagagaatacctggaacgcgataag
gattcggcaaactcatatcgatacttagcttga
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