Setaria viridis (green foxtail): 117858444 Help Entry 117858444         CDS       T07951                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism svs  Setaria viridis (green foxtail) Pathway svs03018   RNA degradation Brite KEGG Orthology (KO) [BR:svs00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     117858444  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:svs03019]     117858444 Messenger RNA biogenesis [BR:svs03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      117858444   mRNA degradation factors    5'-3' decay     Decapping complex      117858444 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Fucose_iso_N2 Motif Other DBs NCBI-GeneID:  117858444 NCBI-ProteinID:  XP_034597404 LinkDB All DBs Position 5:37290976..37297083 Genome browser AA seq 810 aa AA seqDB search MLGVEPDGGGRGGGTSSSAAENFDAGQYAFFGKEPLEGFELGGLEDASGDGNGSGFVGPE EGLYRLSSVGEEMDDQSNLSDIDDLASTFAKLNRSISGIRNPGVIGDRRSISRGSSLTVD WTEDVEFSNWVDQDVFENEEFQESKRWWSSNSSVQQGDSNSRPLSRTSSYPQQPLQHRSS EPIVLPKTSSFTSFPPPAAGGGRSPYPAQGLTRHGSIPSIGAGLQMGSPSMSLSASPYHM VGPSHGLPYTGGMPYGALNLPVNNPMQNDWSNQANPFTGEHLNLLPNLLHKQLSLPNSPM SSLLFSQHQQRLAQIQSSHQNYPNIPPHMLYPHHSAEITGRFDSVGSSHSSRDKRSRSGR GKHNIRFSQPTSDTGGQNGDSGGIKFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQ ACMAKRGATSKQKNNFSPASMKDLPSKSRSSSDQHTYLQVDALGRVSFSSIRRPRSLLEV DHPSSGDGSHDQKSTMRPLEKEPMLAARVTVEDALCLLLEVDDIDRLLQSSQSQDNNFQL KRRRQVLLEGLAASLQLVDPLGPSKSGHSSGLAMKDDVVFLRIVSLPKGRKFLARYLRLL VPGSELTRIVCMAIFRHVRFLFGGLPSDSSAAETTVALAKTVTSCVHHMELGALSACLAA VVCSSEQPPLRPLGSSAGDGASLIIKSVLDRATELLTDHHAAASYTVPNRTLWQASFDAF FGLLTKYCVSKFESIQQMFVMQAPSPVIGPEASKATSKEMPVELLRASLPHTNEQQRQRL LDFAQRSMPVTGFNPQGARGGHITSESVPG NT seq 2433 nt NT seq  +upstreamnt  +downstreamnt atgctgggcgtcgagcccgacggtggcggccgcggcggcggcacgtcctcctccgctgca gagaattttgacgccgggcagtacgccttcttcgggaaggagccactggaggggttcgag ctcggcggcttggaggacgccagcggcgatggcaatggcagtggattcgttgggccagaa gaggggctgtatcgtctctcctcagttggagaagagatggatgatcagagtaacttgtct gacattgatgatcttgcaagcacctttgctaagttgaaccgaagcattagtgggatccgg aatcctggtgttattggggacaggcgatccatttcaagaggaagttctttaactgttgat tggactgaagatgtagagttttcaaactgggtagatcaggacgtatttgaaaatgaggaa ttccaggaaagtaaaagatggtggtcatcaaattcttcagttcagcaaggggactccaac tccaggccactaagtcgaacatcttcctatcctcagcagccactgcagcaccggtcaagt gaacctatcgttttaccaaagacctcttcatttacctcctttccaccaccagctgctggt ggtggcagatcaccttaccctgctcaaggccttacacgtcatgggagcattccgtcaatt ggtgctgggctccaaatgggttctccgagcatgtcactttctgcttctccatatcatatg gttggaccatctcatgggctaccatacacaggaggcatgccgtatggtgctctcaacctg cctgtaaacaatccaatgcaaaatgattggtcaaaccaagctaaccctttcactggggag catcttaatctactgcccaacttattacataaacaattatcacttcctaatagcccaatg tcatcactcctattttctcagcatcagcagagattggcgcagatccaatcatcccatcag aattaccccaatataccaccacacatgttatatccccatcactctgcagagataacaggc aggtttgattctgttggcagctcccattcatcaagagacaagagatcaaggtcagggagg ggaaaacataacattcgcttctctcaaccaacatctgacactggtggccagaatggtgat agtggcggcataaagtttagatccaagtacatgtcatctgaagagatcgaatcaatattg agaatgcagcattccgcaagtcatagcagtgatccttatgtcgttgattactaccatcaa gcttgtatggctaaaaggggtgccacttctaagcaaaagaataacttctccccagcatca atgaaagacttaccgtccaagtctcgatccagcagtgatcagcacacatatcttcaggtt gatgctcttggaagagtatctttctcttccatacgtaggcctcgatctcttcttgaagtt gaccatccttcatccggtgatggctctcatgatcagaagtccactatgaggcccctggag aaagaaccaatgctagcagcaagagtcactgtggaagatgccctttgccttcttcttgag gtggatgacattgaccggctgttgcagtctagccagtcacaggacaacaatttccaacta aagcgaagacggcaagtcctccttgaaggtctagctgcatcacttcagcttgttgaccct ctcggacccagcaaatctggtcattcatctgggttagctatgaaggatgatgttgttttt cttcgcattgtttctctgcccaaaggacgtaaatttttagcacgttaccttcggcttctt gtccctggcagcgagctgacccggatagtatgcatggctatttttcgccatgtgaggttc ttgtttgggggtttgccatcagactctagtgcagcagagactacagttgctcttgcaaag actgttacgtcttgcgtgcatcacatggaacttggtgctcttagtgcctgccttgctgct gtcgtctgttcatcagaacagccacctctccgccctcttggtagctctgctggtgacggg gcttctctaattattaaatcagttctggatcgagcaactgagttgctgactgatcatcat gctgcagccagctacactgtgccaaacaggactctctggcaggcatcatttgatgctttc tttggacttctgacaaaatactgtgtcagtaagtttgaaagtattcagcagatgtttgtc atgcaggcaccaagcccagtaattggacctgaggcttccaaagctactagtaaggagatg cctgttgagctacttcgtgcaagccttcctcatacaaatgagcagcaacgccagaggctt cttgattttgctcagagatccatgccagtaacaggtttcaatccccaaggtgctaggggt gggcacatcacttcagaatctgttcctggttga

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