Setaria viridis (green foxtail): 117858465
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Entry
117858465 CDS
T07951
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
svs04990
]
117858465
Domain-containing proteins not elsewhere classified [BR:
svs04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
117858465
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
PD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_NUP159_NUP214
eIF2A
Beta-prop_HPS5
Beta-prop_SPT8
Ge1_WD40
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_NWD2_C
DUF5711
Beta-prop_WDR75_2nd
Beta-prop_IFT122_2nd
RAB3GAP2_N
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
117858465
NCBI-ProteinID:
XP_034597426
LinkDB
All DBs
Position
5:6617508..6622993
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AA seq
610 aa
AA seq
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MAQLVETYACSPATERGRGILLAGDPKTDSIAYCTGRSVIIRRLDAPLDCWAYQDHAYPT
TVARFSPNGEWVASADASGCVRVWGRYGDRALKAEFRPLSGRVDDLRWSPDGLRIVVSGD
GKGKSFVRAFVWDSGSTVGEFDGHSKRVLSCDFKPTRPFRIVTCGEDFLANFYEGPPFKF
KHSIRDHSNFVNCIRYSPDGSKFITVSSDKKGLIYDGKTGEKIGELSTEGSHTGSIYAVS
WSPDSKQVLTVSADKTAKVWDIMEDASGKLNRTLTCPGTGGVDDMLVGCLWQNDHLVTVS
LGGTFNVFSASNPDKEPVTFAGHLKTISSLVLFPQSSPRTILSASYDGVIMRWIQGVGYG
GRLMRKDNTQIKCFAAVEEELVTSGYDNKVFRIPLNGDQCGDAESVDVGGQPNALNLAIQ
KPEFALITTDSGIVLLHNSKVISTTKVSYTITSSSVSPDGTEAVVGAQDGKLRIYSINGD
TVTEEAVLEKHRGAITSIHYSPDVSMFASADANREAVVWDRASREVKLKNMLYHTARINT
VAWSPDSRLVATGSLDTCAIVYEIDKPAASRITIKGAHLGGVHGLSFIDNDTLVTAGEDA
CIRVWKVVQQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctggtggagacgtacgcgtgctcgccggcgacggagcgcggccgtgggatc
ctcctggcaggggaccccaagacggactcgatcgcctactgcaccggccgcagcgtcatc
atccgccgcctcgacgcgcccctcgactgctgggcctaccaggaccacgcctaccccacc
accgtcgcccgcttctcccccaacggcgagtgggtcgcctccgccgacgcctccggctgc
gtccgcgtctggggccgctacggcgaccgcgcgctcaaggccgagttccgccccctctcc
gggcgcgtcgacgacctccgctggtcccccgatggcctccgcatcgtcgtctccggggac
ggcaagggcaagtccttcgtccgcgcattcgtgtgggactctggcagcacagttggtgag
tttgacgggcactcaaagagggttctgagctgtgacttcaaaccaacacgcccatttcgc
attgttacatgtggtgaagattttctggctaacttttatgaaggaccgccattcaaattc
aagcattccataagggatcactcgaactttgttaactgtatccggtattctcctgatgga
agtaagtttatcactgtaagttctgataagaagggtttgatatatgatggcaagactgga
gaaaagattggagagctttccactgaaggcagtcacacagggagcatatacgctgttagc
tggagtcctgacagcaaacaagttctaactgtttctgctgataaaactgcgaaagtatgg
gatatcatggaagatgcaagtgggaaattgaatagaactttgacttgtcctggtacagga
ggtgtggacgacatgcttgtaggttgcctctggcagaatgaccatcttgtgacagtctct
cttggtgggacatttaatgtgttctctgcaagcaatccggacaaagaaccagttacgttt
gcaggacatttgaagactattagttctttggttttgtttcctcaaagtagcccaagaact
atactgtctgcaagctacgatggtgtcatcatgaggtggatacagggtgttggatatggt
ggcagattgatgcgcaaggacaatacccagatcaaatgctttgctgcagtagaagaagag
cttgttacctcagggtatgataataaggtgtttagaattcctcttaacggagaccaatgt
ggagatgccgagtcagttgatgtaggaggtcagccaaatgctttgaaccttgcaattcag
aaacctgaatttgcactgattaccactgattctgggatcgtactgctgcacaactccaaa
gttatttctacaaccaaagtcagttatactatcacttcatcttctgtttctcctgacggc
actgaagctgttgtgggcgcacaagatgggaaactgcgcatatattccatcaatggggat
acagttacagaagaagctgtgcttgaaaagcaccggggtgctattacttccatacattat
tcaccggatgtttctatgtttgcttctgctgatgccaacagggaagctgttgtgtgggat
cgggcaagtagagaggtcaagctgaagaacatgctgtaccacacagctcggataaacacg
gtggcctggtcacctgacagtcgtttggttgccactggctcattggacacctgcgcaatt
gtctacgagatagacaagccagcagccagtcgcatcaccatcaagggagcacatcttggt
ggagtccatggtttatcctttatcgacaatgatactctggtgactgccggtgaggatgct
tgcattcgtgtctggaaggtggttcagcaatag
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