Setaria viridis (green foxtail): 117858492
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Entry
117858492 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K14791
periodic tryptophan protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117858492
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
90S particles
Other 90S particles
117858492
Pre-60S particles
Other pre-60S particles
117858492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_DCAF4
NBCH_WD40
MIOS_WD40
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_WDR75_2nd
PALB2_WD40
Beta-prop_SPT8
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
117858492
NCBI-ProteinID:
XP_034597456
LinkDB
All DBs
Position
5:complement(44414838..44419580)
Genome browser
AA seq
493 aa
AA seq
DB search
MEDSLNGMISAISWVPRGAAKNVPVVAEPPTQEEIDEAIKTLALGGDGGSDVDEDDDAGT
MELDGAEAEEELDEVARAKAVAKALAKGSSQADDVADELRELNMDAYDDEEEGIEIFSSG
MGDLYYPSNDMDPYLNNNNDEDDDDDDEIEDKMIKPTDYLLVCAHSDEDVFSLQVNILEE
TEDGEQNMFVHHDVPLPAFPLCTAWMDFNLKGGDKGNFIAVGTMDPAIEIWDLDMVDEVQ
PHMVLGGLSKKKKKAKGKKGKKYKKGSHRNSVLGLAWNKEVRNVLASASADTTVKIWDLA
VGKCAVTLEHHDDKVQSVAWCPQSPEVLLSGSFDKTVAMNDMKDGGQSCHKWSVEADVES
LAWDPHNEHSFVVSLENGMVQAFDKRTASSSSSGRSTYTLHAHEKAVSSISFNPSAPNFL
ATGSTDKMVKLWDLSNNKPSCIASLNPKLGAIFSVSFSHDNSFWLACGGSKGKLKVWDTL
SEPAVANKFGRQK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcgctgaatgggatgatctcggcgatttcctgggtgccccggggcgccgcc
aagaatgtaccggtcgtcgccgagccgcccacgcaggaggagatcgacgaggccatcaaa
accttggccttgggcggagacggcgggagcgatgtcgacgaggatgatgatgctggcacc
atggagcttgacggcgccgaggccgaggaggagcttgatgaggtcgcccgggccaaggcc
gtcgccaaggcgctcgccaagggctccagtcaggcggacgacgtcgccgatgagcttcgc
gagctcaacatggatgcttacgacgacgaggaagaaggaatcgagattttcagctccgga
atgggggacctgtactatcccagcaatgacatggacccctatctcaacaacaataacgat
gaggatgacgatgacgatgatgagattgaagataagatgatcaagcctactgattatctt
cttgtgtgtgcacacagcgatgaagatgtcttttctcttcaggtcaacatacttgaagaa
acagaggatggtgagcaaaatatgtttgtgcatcatgatgttcctctccctgcttttccg
ctctgcactgcttggatggattttaatctgaagggtggtgacaaagggaattttattgct
gttggaaccatggatcctgctattgaaatatgggacctagatatggttgatgaggtgcaa
cctcacatggttttaggaggactttcaaaaaagaagaagaaagcaaagggcaaaaagggg
aaaaagtataagaagggaagtcatagaaattctgtgcttggtcttgcatggaacaaggaa
gtcaggaatgttctagctagtgcaagtgcggacacaactgttaaaatttgggatttagct
gttggcaaatgtgcagttacacttgaacatcatgatgacaaggttcaatcagttgcttgg
tgcccacagtcacctgaagttcttctcagtggatcatttgataaaacagttgccatgaat
gatatgaaagatggtggacagagttgccataaatggtctgttgaagcagatgtggaaagt
ttagcttgggatccacacaatgaacattcatttgtggtaagtcttgaaaatgggatggtt
caagctttcgataagcgaacagcttcatcaagttcttctggccgatccacatatactctt
catgcacacgaaaaggctgtttcatccatctccttcaacccatcagcccctaattttctt
gcaacaggctcgactgataaaatggtgaaactctgggatctatcaaacaacaagccatca
tgcattgcctctctgaatccaaagcttggagctattttctcggtatcattttcacatgac
aactccttctggttagcctgtggaggatcaaaaggcaaactaaaggtctgggacacacta
tcggagccagcggtggctaataaattcggcagacagaaatga
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