KEGG   Setaria viridis (green foxtail): 117858492
Entry
117858492         CDS       T07951                                 
Name
(RefSeq) uncharacterized protein
  KO
K14791  periodic tryptophan protein 1
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:svs03009]
    117858492
Ribosome biogenesis [BR:svs03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    117858492
  Pre-60S particles
   Other pre-60S particles
    117858492
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_DCAF4 NBCH_WD40 MIOS_WD40 Beta-prop_DCAF12 Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_WDR75_2nd PALB2_WD40 Beta-prop_SPT8 BBS2_Mid
Other DBs
NCBI-GeneID: 117858492
NCBI-ProteinID: XP_034597456
LinkDB
Position
5:complement(44414838..44419580)
AA seq 493 aa
MEDSLNGMISAISWVPRGAAKNVPVVAEPPTQEEIDEAIKTLALGGDGGSDVDEDDDAGT
MELDGAEAEEELDEVARAKAVAKALAKGSSQADDVADELRELNMDAYDDEEEGIEIFSSG
MGDLYYPSNDMDPYLNNNNDEDDDDDDEIEDKMIKPTDYLLVCAHSDEDVFSLQVNILEE
TEDGEQNMFVHHDVPLPAFPLCTAWMDFNLKGGDKGNFIAVGTMDPAIEIWDLDMVDEVQ
PHMVLGGLSKKKKKAKGKKGKKYKKGSHRNSVLGLAWNKEVRNVLASASADTTVKIWDLA
VGKCAVTLEHHDDKVQSVAWCPQSPEVLLSGSFDKTVAMNDMKDGGQSCHKWSVEADVES
LAWDPHNEHSFVVSLENGMVQAFDKRTASSSSSGRSTYTLHAHEKAVSSISFNPSAPNFL
ATGSTDKMVKLWDLSNNKPSCIASLNPKLGAIFSVSFSHDNSFWLACGGSKGKLKVWDTL
SEPAVANKFGRQK
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggaggactcgctgaatgggatgatctcggcgatttcctgggtgccccggggcgccgcc
aagaatgtaccggtcgtcgccgagccgcccacgcaggaggagatcgacgaggccatcaaa
accttggccttgggcggagacggcgggagcgatgtcgacgaggatgatgatgctggcacc
atggagcttgacggcgccgaggccgaggaggagcttgatgaggtcgcccgggccaaggcc
gtcgccaaggcgctcgccaagggctccagtcaggcggacgacgtcgccgatgagcttcgc
gagctcaacatggatgcttacgacgacgaggaagaaggaatcgagattttcagctccgga
atgggggacctgtactatcccagcaatgacatggacccctatctcaacaacaataacgat
gaggatgacgatgacgatgatgagattgaagataagatgatcaagcctactgattatctt
cttgtgtgtgcacacagcgatgaagatgtcttttctcttcaggtcaacatacttgaagaa
acagaggatggtgagcaaaatatgtttgtgcatcatgatgttcctctccctgcttttccg
ctctgcactgcttggatggattttaatctgaagggtggtgacaaagggaattttattgct
gttggaaccatggatcctgctattgaaatatgggacctagatatggttgatgaggtgcaa
cctcacatggttttaggaggactttcaaaaaagaagaagaaagcaaagggcaaaaagggg
aaaaagtataagaagggaagtcatagaaattctgtgcttggtcttgcatggaacaaggaa
gtcaggaatgttctagctagtgcaagtgcggacacaactgttaaaatttgggatttagct
gttggcaaatgtgcagttacacttgaacatcatgatgacaaggttcaatcagttgcttgg
tgcccacagtcacctgaagttcttctcagtggatcatttgataaaacagttgccatgaat
gatatgaaagatggtggacagagttgccataaatggtctgttgaagcagatgtggaaagt
ttagcttgggatccacacaatgaacattcatttgtggtaagtcttgaaaatgggatggtt
caagctttcgataagcgaacagcttcatcaagttcttctggccgatccacatatactctt
catgcacacgaaaaggctgtttcatccatctccttcaacccatcagcccctaattttctt
gcaacaggctcgactgataaaatggtgaaactctgggatctatcaaacaacaagccatca
tgcattgcctctctgaatccaaagcttggagctattttctcggtatcattttcacatgac
aactccttctggttagcctgtggaggatcaaaaggcaaactaaaggtctgggacacacta
tcggagccagcggtggctaataaattcggcagacagaaatga

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