Setaria viridis (green foxtail): 117858546
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Entry
117858546 CDS
T07951
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
117858546
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GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
117858546
NCBI-ProteinID:
XP_034597521
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Position
1:28063868..28067697
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AA seq
706 aa
AA seq
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MSASQSSMSGAGEAGVRTLVWFRRDLRVEDNPALAAAARKAGEVVPAYVWAPEEDGAYYP
GRVSRWWLSQSLKHLDASLRRLGASRLVTRRSDDAVVALLDLVRSTGATHLFFNHLYDPL
SLVRDHRVKELLTAEGITVQSFNSDLLYEPWEVLDDDGCPFTMFAPFWNRCLCMPDPAAP
LLPPKRINSGDLSRCPSDELIFEDESERGSNALLARAWSPGWQNADKALTAFLNGPLIDY
SVNHKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGEESCTLFLRSIG
LREYSRYLTFNHPCSHEKPLLSHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATG
WLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDR
IDNPQFEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGVELGSNYPRPIV
ELDAANSRLQDALSEMWELEAASRAAMENGMEEGLGDSSDVPPIAFPQELQMEVDRQPVR
HATQTPMMAGRRREDQMVPSMTSSFIRAETELTADFGNISEDSRPEVPSNMHLQPRTERE
ETVDGGTANAVRMNGNHQQHNFQNNTHRVLGVAPSVSEASSSWTGREGGVVPVWSPPAAS
GHSDPYAADEADISSRNYLDRHPQSHTMMNWSQLSQSLTTGWEVDN
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtcgcagtcgtcgatgagcggcgccggggaggcgggggtgcggacgttggtg
tggttcaggcgggacctgcgggtggaggacaacccggcgctggcggcggccgcgcggaag
gccggggaggtggtgcctgcctacgtgtgggcgccggaggaggacggggcctactacccc
ggcagggtgtcccggtggtggctcagccagagcctcaagcacctggacgcctcgctccgc
cggctcggggccagccgcctcgtcacccgtcgctccgacgacgcagtcgtcgctctgctc
gacctcgtccgcagcaccggcgccacgcacctcttcttcaaccacctctacgacccactg
tcgctggtccgggaccaccgcgtgaaggagctgcttacggccgagggcatcaccgtgcag
tccttcaactccgaccttctgtacgagccgtgggaggtcctcgacgacgacggctgcccc
tttaccatgttcgcacccttttggaacaggtgcctgtgcatgcccgaccctgcagcgcca
ctgctgccgcccaagaggatcaattcaggtgacttgtcgaggtgcccatccgacgagctg
atatttgaagacgagtccgaaaggggaagcaatgcgctgctggcacgggcatggtcaccg
gggtggcagaatgctgacaaggcgcttactgccttcctcaatggcccattgatcgactac
tctgtgaatcacaagaaggctgacagcgcgagcacatccctgctgtccccatacctgcac
ttcggtgagctcagcgtccgcaaggtcttccatcaggtccggatgaagcagctgatgtgg
agcaacgaaggcaaccacgctggcgaggagagctgcactctgttcctccgctccatcggc
ctgcgggagtactcaaggtacctcaccttcaatcacccctgcagccatgagaagccgctc
ctgtcgcacctcaggttcttcccttgggtcgtcaacgaggtatacttcaaggtttggagg
caggggagaactggctaccctcttgtcgacgctggcatgagggagctctgggcaactggg
tggctgcacgatcgcatacgtgtggtggtctcgagtttttttgtcaaggtgctccagttg
ccatggcgctgggggatgaagtatttctgggacaccttgctggatgctgacctcgagagt
gacgcgctaggttggcagtacatttccgggtccctccctgatggccgtgagcttgaccgc
atcgacaaccctcagtttgaagggtacaagtttgacccacatggggagtatgtccggcga
tggctaccagagctggcgaggttgccaacggaatggatacaccacccctgggatgcacct
gagtctgtgcttcaagctgcgggagttgagctaggctccaactatcctcgccccattgtt
gagttagatgcagccaattccaggttacaggatgccctgtcagaaatgtgggagcttgag
gcggcctctcgggctgcgatggaaaatggaatggaagaaggccttggcgactcctcggat
gtgccaccaatcgccttccctcaagaattacagatggaagtggaccgacaaccggtccga
catgctacccagacaccgatgatggctggtcggagacgagaagatcagatggtgcctagc
atgacttcttcattcattagagctgaaacagaactcactgcggattttggcaacatcagt
gaggacagtaggccggaggtgccatcaaacatgcatttgcagcctcggacggagagggaa
gaaacggttgacggtggcactgccaatgctgtcaggatgaatggcaatcatcagcagcat
aactttcagaacaacacacaccgggtgctaggtgttgctccatcggtttcagaggcatcg
agcagctggacgggcagagaaggtggagtggtaccggtctggtcaccaccggcagcttca
ggacattctgatccttatgctgctgatgaggctgacatttccagtaggaattatttggac
aggcacccgcaatcacatacgatgatgaactggagtcaactctctcagtcattgacaaca
gggtgggaagtggataattga
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