KEGG   Setaria viridis (green foxtail): 117858580
Entry
117858580         CDS       T07951                                 
Name
(RefSeq) protein decapping 5 isoform X1
  KO
K18749  protein LSM14
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117858580
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117858580
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 117858580
NCBI-ProteinID: XP_034597558
LinkDB
Position
5:5846201..5851650
AA seq 646 aa
MAAEAPPSAAPSSSSSAPAPRPPAAAGSGSGGGAAASPESYIGSLISLTSKSEIRYEGVL
YNINTEESSIGLRNVRSFGTEGRKKDGMQIPASDKLYEYILFRGSDIKDLQVKSSPPPPA
PPQAASLHNDPAIIQSHYSQPASTSSSLPSAGGTVLPDLSSQAAQYGLQRPGFQSNLPLY
QPGNAPWGSSVAPQAGSASTLSVPSMYWQGYYGPSSGLPPHLQQPPFLQPTPGLSVPQNL
QYPGLNPSLPSGMQKLSELQPSLMPPVTSQGPSSGILPATTAPASATLLAPESSKPLLPN
MGSLFTPPVTSLGATFPFPSQPTSIAETSAALQNLTSFGSNKASALPGSTLACQSVSQSV
SSTVAPSSSSQVEMPVPLLAPSGQLLQNTASMLPSSHSLQTPLQMANKEAKPVEPKAKAA
EPLLPDPLLPDPPSRGLPENKEPILPLPKQTPQKYNGSGSHNHHNFRGRGRGRGSAFSQS
VTAFTEEFDFTAMNEKFNKDEVWGHLGKKSQSRDKDGEIGGDVFDEDLEVEETENPELAV
KVQPVYVKDDFFDSLSSGTFGRGGGPNGRGRFSERRRVDTETFGEFPRHRQPYRGGARGY
RGGGRSRGGYYGGRGYGNMGPGGYGNMGTGGPGNSYPQRGGSYGRD
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggcggcggaagcgccaccgtcggcggcgccgtcctcctcctcctccgcgccggccccg
cgcccgccggccgcggcagggtccggctccggcggcggcgcggccgcgtccccggagtcg
tacatcgggagcctcatcagcctgacctccaagagcgagatcaggtacgagggcgtcctc
tacaacatcaacaccgaggagtccagcatcggcctgcgcaatgtgcggtcgtttgggacc
gaagggcggaagaaagatgggatgcagattcctgctagcgacaaactttatgagtacatc
ctctttcggggaagtgatatcaaggatttgcaagttaagtcatcgccaccgccgccggca
ccaccacaagcagcttccctgcacaatgatcctgccataatccagtcacattattctcaa
ccagcatcaacttcgtcgagtttgccttcagctgggggtacagttttaccagacctcagc
tcccaggcagctcaatatgggcttcagaggccaggctttcagagcaatcttcctctgtat
caaccggggaacgctccatggggatcttcagtggcgcctcaggcaggaagtgcttcaaca
ctttcagttccctcaatgtattggcaaggatactacgggccttcaagtggactgccacct
catttgcagcaacctccttttcttcagcccacaccaggactgtcggttcctcagaatctc
caatatccaggacttaatccttctttgccatctgggatgcaaaagctgtcagaactccaa
ccctcattgatgccacctgttactagtcaaggtccttcatcaggtatcctgcctgctaca
acagctcctgcctctgctaccttattagctccagaaagttcaaagccccttctgccgaac
atgggatcgctgtttactcctcccgtgacatctcttggtgccacttttccttttccaagc
cagccaacttccatagctgaaactagtgcagcgttacagaacttaacttcttttggtagc
aacaaggcttctgctcttccaggatcaacactggcatgccaaagtgtttctcagtctgtt
tcttcgactgttgccccatctagctcatcccaagtggagatgcctgtgcctttgttagca
ccatcaggtcagctattgcagaacacggcatccatgcttccatcctcacactccctgcag
acacctttacagatggccaacaaagaggccaagccagttgagcctaaggcaaaggctgct
gaaccattgctacctgaccctttgctacctgatccaccatcacgtggcctgcctgaaaat
aaggagcctatattaccattgccgaaacaaacacctcaaaagtacaatggatctggttca
cacaatcaccacaactttaggggccgtggaaggggtagagggagtgcgttttcacagtct
gtaacagcatttactgaagaatttgatttcacggccatgaatgagaagttcaacaaagat
gaagtctggggtcatcttggtaagaaatcccagtctagggataaggatggtgagatcgga
ggtgatgtgtttgatgaagacctggaggttgaggaaacagaaaacccagagttggctgtc
aaggttcagcctgtttatgtcaaggacgacttttttgattccctctccagcggaacattt
ggacgtggaggaggaccaaacggaaggggcagattttcagaaaggcggagagttgacaca
gagacgtttggtgagtttccaaggcatcggcagccgtaccgtggcggcgcccgtggttac
cgaggtggtggccgttcccgtggtggatactatggtggcagaggctatgggaacatgggg
ccgggcggctatggaaacatggggacaggtggccctggaaattcgtatcctcagcgtggc
gggtcgtatgggagagattga

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