Setaria viridis (green foxtail): 117858719
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Entry
117858719 CDS
T07951
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1
KO
K08517
vesicle transport protein SEC22
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04130
SNARE interactions in vesicular transport
svs04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117858719
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117858719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117858719
Membrane trafficking [BR:
svs04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
117858719
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
117858719
NCBI-ProteinID:
XP_034597735
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Position
5:complement(26472166..26476381)
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AA seq
218 aa
AA seq
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MVKLTMIARVTDGLPLAEGLDDGRDQKDADFYKQQAKLIFKNLSKGHHEASRMSIETGTY
YFHYIIEGRVCYLIMCDRSYPKKLAFQYLEDLKNEFERVNGNQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSRRLTSDTIV
YANKAKDLNRQALIRKYAPVAIVIGVVFILFWLKNKIW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacaatgatagcacgtgttactgatggccttccactggcagaagggttg
gatgatggacgagatcagaaggatgctgatttctacaagcagcaagctaaactcattttc
aagaacttgtcgaaagggcatcatgaagcttcccggatgtcaattgagacagggacatac
tatttccactacatcattgaaggccgagtatgttatttgattatgtgtgaccgctcttat
ccaaaaaaacttgcattccagtacctagaagatctgaaaaatgaatttgagagggtcaac
ggaaatcaaatagaaactgccgccaggccgtatgcttttatcaagtttgatacattcatc
cagaagactaagaaactgtatttggatacaagaactcaaaggaacattgcaaaattgaat
gatgagctctatgaggtgcatcaaattatgacccgcaatgttcaagaggtgcttggtgtt
ggtgaaaagctagaccaggtcagtgaaatgtcaagaagattgacatctgacacgatagta
tacgcaaataaggcaaaggacctcaatcggcaggccttgattcggaagtatgctcctgtt
gcgattgtgattggggtggtcttcattctcttttggctcaaaaacaagatatggtga
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