Setaria viridis (green foxtail): 117858728
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Entry
117858728 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K09422
transcription factor MYB, plant
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117858728
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
117858728
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
117858728
NCBI-ProteinID:
XP_034597745
LinkDB
All DBs
Position
5:30221644..30222854
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AA seq
267 aa
AA seq
DB search
MATRVAMACGRAGDQPAVRKGPWTLEEDLILVGYISEHGEGSWDNLARAAGLNRNGKSCR
LRWLNYLRPGVRHGSITPAEDAAIRELHAALGNKWSKISKLLPGRTDNEIKNYWRTRIQK
KPAAAAKAPHQQPPAAVVSEGASSAAGDYYWCGAKPDPADQQAYWSQKAAVAAATAAAGV
GSGEGVSSSTPTSQDSSTGAGDWRMQQTSSCPYYSELMMSWIAGGHSETGVGVDALTTHF
SSSGQFSDSFWNAVENFWETKPVTGAF
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagggtggccatggcgtgcggtcgcgccggcgaccagccggcggtgcgcaag
gggccgtggacgctggaggaggacctcatcctcgtcggctacatctccgagcacggggag
ggatcctgggataacctcgcgcgcgctgctggtctgaaccgcaacgggaagagctgcagg
ctgcggtggctaaactacctgcggccgggggtgcggcacggcagcatcacgccggcggag
gacgcggcgatccgggagctccacgcggcactgggcaacaagtggtccaagatctccaag
ctcctccccggccggaccgacaacgagatcaagaactactggaggaccaggatccagaag
aaaccggcagcagcagccaaagccccgcaccagcaaccgccggcggccgtcgtcagcgag
ggcgccagctccgccgccggggactactactggtgcggcgcgaagcccgaccccgccgat
cagcaagcgtactggtcccagaaggccgccgtggcagctgcgacggcggcggcgggggtc
ggaagcggcgagggcgtatcgtcgtccacgccgacgagccaggacagctccaccggtgct
ggagactggcgcatgcagcagacgagtagttgtccctactactcggagctgatgatgagc
tggatcgccggcggccacagcgagacgggcgtcggcgtggacgctctgacgacgcacttc
tcctcgtccggccagttcagcgacagcttctggaacgctgtggagaatttctgggagacg
aaaccggtgacaggtgcattctga
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