Setaria viridis (green foxtail): 117858761
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Entry
117858761 CDS
T07951
Name
(RefSeq) disease resistance protein RPP13
KO
K15559
regulator of Ty1 transposition protein 103
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117858761
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117858761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
AAA_16
LRR_At5g56370
LRR_R13L1-DRL21
AAA_22
NACHT
nSTAND3
TsaE
Motif
Other DBs
NCBI-GeneID:
117858761
NCBI-ProteinID:
XP_034597778
LinkDB
All DBs
Position
5:complement(44494012..44497787)
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AA seq
929 aa
AA seq
DB search
MAETAITTVLAKVAELVAWEAAVLLEVGDDVRLLRDKLEWLHTFIRDADRRRRLRDDEFV
AVWVRQTRDVAFEAEDALDDFLHRAGRRGMAPRSRAAAAPGCGVVGWWPRCTGQVALRHD
LYGRIRQIKKRLDEISENRAAYNIEHTPAPAWAASCSSATTLAAWDDLEEYTVGLDKYSD
MLKEQLLDDAVTARAVVSISGESSIGKTTLARKVYQSPEVRNHFEIRTWTVLPHKCRAAD
VLRDIHRQMTSQLRRAPSRQASEEGCDGAAARACGPGKDISNQLYKNMAGRRYLVVVDGS
IAVSDWNSLRTSLPDDGNGSRVLLITDSAGLEAVGHAGPAYDSVELTRLSPENTYEVFRR
RVFGRGDCPGRYKSRYYQDVFRITRGLPLSVVILAGVLRSKELPAEWDEVMAQLAPAREQ
QHKGGGAGSHNGRRIMSLAFDDLPHHLKSCFLYLAAMRESTPVEAARLVRLWVAEGFVRP
RRGSTMEEVGQEYLKQLISRCMVQLVDKDDFGAVQTVVVHDRLHAFAQDEAQEASFVESH
DSTDVLAPATVRRLAVLGSTTNRYVQLSNALPKLRSIICDFVEGRNRSGGKCIQGSDLGF
LHASKFLRVIDIQGLELKKLPNEIGSMIHIRYLGLQCGDLEKLPTTIGNLVNLQSLILGG
RRVLEVTAAFWRIPTLRHVVAPLALPSRALGDLHSLQTLHGVRPCRWYGGDNPLAKAANL
RSLELIELTAEHAGALEAALESLDLLAHLVLRGDSLPASVFAVPSLRRLQSLKLLGPVDS
PEGPDGAEDARYIRPNLTRLSMWGTMVKQRFVDMLAELPSLAELTLMNDAYDGDRLAFGE
AGFRSLHELKLGLPKLEEWAVGAGSMPGLATLTLYRCAKMQMLPEALAGMTELEEVVLYS
MLDIVGRIKEGEGQDHHKVKHVPVIQTIY
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacggcgatcacgacggtgctggcgaaggtggcggagctggtggcgtgggag
gcggcggtgctgctggaggtaggcgacgacgtgcgcctcctccgcgacaagctcgagtgg
ctccacaccttcatccgcgacgccgaccgccgccgccgcctccgcgacgacgagttcgtc
gccgtctgggtgcgccagacacgggacgtcgccttcgaggccgaggacgcgctcgacgac
ttcctccaccgcgcgggccggagggggatggctcctcggagccgcgccgccgccgccccg
ggctgcggcgtcgtcggttggtggccacggtgcacaggccaggtcgcgctccgccacgac
ctctacggccgcatccggcagatcaagaagcggctcgacgagatctccgaaaaccgcgcc
gcctacaacatcgagcacacgcccgcgccggcctgggccgcctcctgctcctccgccacc
accctcgccgcctgggacgacctggaggagtacacggttggcttggacaagtacagcgac
atgctgaaagagcagctcctcgacgacgccgtgaccgcgcgcgccgtcgtgtccatctcc
ggcgagagcagcatcggcaagacgacgctggcgcggaaggtgtaccagagccccgaggtc
cgcaaccacttcgagatccgcacgtggacggtgctcccgcacaagtgccgcgccgccgac
gtcctccgcgacatccaccgccagatgacctcccagctgcggcgggccccatccaggcag
gcctccgaagaaggctgcgacggcgccgccgccagggcgtgcgggcccgggaaagacatc
agcaaccagctgtacaagaacatggcggggcggcggtacctcgtcgtcgttgacggcagc
atcgccgtcagcgactggaacagcctccgaacctcgctccccgacgacggcaacggcagc
agggtgctcctgatcacggactcggcgggcctggaggcggtcggacacgccgggcccgcg
tacgactcggtcgagctgacccggctcagcccggagaacacgtacgaggtgttccggcgc
cgggtgttcggccgcggcgactgccccggccggtacaagtcgcggtactaccaggacgtg
ttccggatcacccgcggcctgccgctgtcggtcgtcatcctcgccggcgtcctgcggtcg
aaggagctgccggcggagtgggacgaggtgatggcgcagcttgccccggcgcgggagcag
cagcacaagggcggcggcgccggcagccacaacggccggcggatcatgtcgctggccttc
gacgatctgccgcaccacctcaagtcgtgcttcctctacctggcggcgatgcgggagagc
accccggtggaggcggcgcggctggtccggctgtgggtcgccgaggggttcgtgcggccg
cggcgcgggagcaccatggaggaggtggggcaggagtacctcaagcagctcatctcccgg
tgcatggtgcagctggtggacaaggacgatttcggcgccgtgcagacggtggtggtgcac
gaccggctgcacgccttcgcgcaggacgaggcgcaggaggctagcttcgtcgagagccac
gacagcaccgacgtgctcgcgccggccaccgtgcgccgcctcgcagtcctcggctccacc
accaaccggtacgtccagctcagcaacgcgctacccaagctgcgctccatcatctgcgac
ttcgtggagggccgcaacaggtccggcggcaagtgcatccagggcagcgacctgggtttc
ctccatgcctccaagttcctccgcgtcattgacatccaggggctcgagctcaagaagctc
cccaacgagatcggctccatgatccacatcagatacctgggtctccaatgcggcgacctg
gagaagctcccgaccaccataggcaaccttgtcaacctgcagtcgctcatcctcggcggc
cgccgcgtcctggaggtgaccgccgcgttctggaggatccccacgctgcggcacgtcgtg
gcgccgttggcgctgccgagcagggccctgggcgacctgcacagcctccagacgctccac
ggcgtgcggccctgccgctggtacggcggcgacaacccgctggcgaaggccgccaacctc
cgctccctggagctcatcgagctgaccgccgagcacgccggcgcgctcgaggccgcgctc
gagagcctcgacctcctggcgcacctagtgctgcgcggcgactcgctgccggcgagcgtg
ttcgccgtcccgagcctccgccggctgcagagcctgaagctgttaggccccgtggactcg
ccggaggggcccgacggcgcggaggacgcccggtacatccggccgaacctgacccggctc
tcgatgtggggcaccatggtcaagcagaggttcgtggacatgctggcggagctgccgagc
ctggccgagctgacgctgatgaatgacgcctacgacggcgaccggctggcgttcggggag
gccgggttccggagcctgcacgagctcaagctcggcctgccgaagctggaggagtgggcg
gtcggcgcgggctccatgccggggctcgcgaccctgacgctgtaccggtgcgccaagatg
cagatgcttccggaggcgctcgccgggatgacggagctggaggaggtggtgctgtacagc
atgctcgacattgtgggcaggatcaaggaaggcgaagggcaggatcaccacaaggtcaag
cacgtccccgtcatccagactatctactga
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