Setaria viridis (green foxtail): 117858789
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Entry
117858789 CDS
T07951
Name
(RefSeq) transcription factor GAMYB
KO
K09422
transcription factor MYB, plant
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117858789
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
117858789
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
117858789
NCBI-ProteinID:
XP_034597811
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Position
5:38966201..38969962
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AA seq
551 aa
AA seq
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MYRVKSESDCDMMLQDQMDSPVADDVSSGEGSPHRGSGPPLKKGPWTSAEDAILVDYVKK
HGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHAKMGNKWAR
MAANLPGRTDNEIKNYWNTRIKRCQRAGLPIYPASVCNQSSSEDQQVSGDFNCSENISND
LLSGNGLYLPDFTSDNFIANPDALSYAPHLSAVSIGNLLGQSFASKNCSFMDQVDHSGML
KQSGCVLPALSDTIDGVLSSVDQFSNGSEKLKQALGFDYLNEANASSKTIAPFGVALSGS
HAFLNGNFSASRPINGPLKRELPSLQDTESDPNSWLKYTLAPAMQPTELVDPYLHSPIAT
PSVKSECASPRNSGLLEELLHEAQGRSGKNRQPSVRSSSSSANTPCETTTVVSPEFDLCP
EYWDDHHSSFINECAPFSGYSFTESTPVSAASPDIFQLSKISPAQSPSMGSGEQAVEPRH
ESAGSPHRENLRPDALFSGNSADPSTFNNAIAILLGNDMNAECKPVLGGGITFGSSSWSN
MPNACEISEFK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgggtgaagagcgagagcgactgcgacatgatgctgcaggaccagatggactca
ccggtggccgacgatgtgagcagcggcgaggggtcgcctcacaggggtagcgggccgccc
ctgaagaaaggcccgtggacgtcggcggaggacgccatcctggtggactacgtgaagaag
cacggcgaggggaactggaacgcggtgcagaagaacaccgggctgttccgctgcggcaag
agctgccgcctccggtgggcgaaccacctcaggcccaacctcaagaagggggccttcacc
cccgaggaggagcgcctcatcatccagctccacgccaagatggggaacaagtgggcgagg
atggctgctaatttgccagggcgtactgacaatgaaattaagaattactggaacactcga
ataaagagatgccaacgagctggtcttcctatctatcctgctagtgtatgcaatcaatct
tcaagtgaagatcagcaagtctctggtgattttaactgcagcgagaatatatcgaatgat
cttctgagtgggaacggtctttatctaccagattttaccagtgacaatttcattgctaat
ccagatgctttatcctatgcaccacacctttcagcagtttcaataggcaatttgctcggc
cagagttttgcatcaaagaattgtagcttcatggatcaggtagaccactcagggatgctg
aaacaatctggctgtgtgctccctgcattgagcgacaccattgatggcgtgctttcctcg
gtggaccaattttcaaatggctctgagaagctcaagcaggctctaggttttgattatctc
aatgaagccaatgctagcagcaagactattgcaccttttggggttgcactttctggcagc
catgcctttttaaatggcaacttctctgcttctaggcccatcaatggtcctttgaagagg
gagctcccttcactccaagatactgaatctgatccaaatagctggctcaagtatactttg
gctcctgcaatgcagcctaccgagttagttgatccttacctgcactctccaatagcaacc
ccatcagtgaaatctgagtgtgcatcaccaagaaacagtgggcttctggaagagctgctt
catgaagctcagggacgatccgggaagaaccgacaaccatctgtcagaagttcaagttcc
tctgctaatacaccatgtgagactactacggtggttagcccagagtttgatctctgcccg
gaatattgggacgatcatcacagttctttcatcaatgaatgcgctcctttcagtggatat
tcattcactgaatccactcctgttagtgccgcatcacctgatatctttcagctctccaaa
atttctcctgcacaaagtccttcaatgggctctggtgagcaggcagtagagcctagacat
gagtcggcaggttcacctcatcgtgaaaacctgaggccagatgcactattctctggtaac
tcagctgatccttccactttcaacaatgccatcgcaattctactgggcaacgacatgaac
gccgagtgcaaacctgtcctcggtggtggcatcacgtttggttcttcctcatggagcaac
atgccaaatgcatgtgaaatttcggaattcaaatga
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