Setaria viridis (green foxtail): 117858821
Help
Entry
117858821 CDS
T07951
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117858821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117858821
Membrane trafficking [BR:
svs04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
117858821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Prominin
Spectrin
DUF3792
RNF180_C
SNARE
Pox_EPC_I2-L1
DUF5089
Motif
Other DBs
NCBI-GeneID:
117858821
NCBI-ProteinID:
XP_034597850
LinkDB
All DBs
Position
5:complement(25789991..25793460)
Genome browser
AA seq
221 aa
AA seq
DB search
MSEVFEGYERQYCEASASLTRKCTAAAALQGEKLKQKAAEIKSGIDGAEALIRKMDLEAR
SLQPSVRAGLLAKIREYKSDLNNLKGALKRITSGNAQQGAREELLESGMADALGVSADQR
SRLLRTTERQNQTTDRLRDSHRTMLETEDLGVSILHDLSQQRQSLLHAHRALDDVDVNVS
KSRKTIGSMVRRMDRNKWIIGLIIALLVLAILVILYFKLVH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtcttcgagggctacgagcgccagtactgcgaggcctccgcctccctcact
cgcaaatgcaccgctgccgcagccctccaaggagagaagctgaagcagaaggcggcggag
atcaaatctggcatcgatggcgccgaggcactgataaggaagatggatcttgaagcaagg
agcctccaaccaagcgttagagctgggctcctagcaaagatcagggagtacaagtcagat
cttaataacctcaagggagcgttgaagaggattaccagtggtaacgcacagcaaggggcg
agagaggaattgctggagtcaggaatggcagatgcattgggggtttctgctgatcaaaga
tcaagactgctcaggacaactgaaagacagaaccaaacaactgataggctcagagatagc
catagaactatgctggagactgaagatcttggagtctccatcttgcatgatctgagtcaa
caacgccaatctctcttgcatgctcatcgtgcattggatgacgtcgatgtcaacgttagc
aagagcaggaagaccattggaagcatggtgaggagaatggatagaaataagtggatcatc
ggtctcatcatagccctccttgtcttggccatcctagtaatcctgtatttcaagctcgtg
cactag
DBGET
integrated database retrieval system
