Setaria viridis (green foxtail): 117858844
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Entry
117858844 CDS
T07951
Name
(RefSeq) AP3-complex subunit beta-A
KO
K12397
AP-3 complex subunit beta
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117858844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117858844
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Others
AP-3 complex
117858844
Endosome - Golgi transport
117858844
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
AP3B1_C
HEAT
AP3B1_C_2
TPR_TNPO3_IPO13_3rd
PPP2R1A-like_HEAT
Svf1_C
Motif
Other DBs
NCBI-GeneID:
117858844
NCBI-ProteinID:
XP_034597873
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Position
5:46391064..46396988
Genome browser
AA seq
1099 aa
AA seq
DB search
MFGLQASGAAASWVVGRMGTDAHLYDDPDDASIPALLDSRFDADKVDALKRLLALIAQGV
DVAHLFPQVVKNVASQSLEVKKLVYLYLLHYADKRQNEALLSINIFQKDLSDINPLVRAW
ALRTMAGIRLHVVAPLVLVAVKKCARDPSAYVRKCAAYALSKLCDLLPDQATTLQEIVDI
LFDDNSPGVVGAAAVAFKSVCPTCLPLLSKHFRRLCQTLPDIEEWTQIILIDILLRYVIA
RHGLVEDSLLSASNLSTEVQGITESGPVATMPTQPDSIGNGVCGTISNIMLFRHYIEEYS
GFPDRQGNNSSFSSVTTNINDDVALLLKCTSPLLWSRNSGVILAAASVHWIMAPVGDLKR
IIGPILFTLRSSPDAAYAMLGNILVFAKTMPSLFAPFYEDFFINASDPYQTRALKLEILT
TIATEPSIPAIFEEFQDYIKDPDRKFVADTVAAIALCAQKLPSIATACLEGLLALVFYES
SICNSVHFDGEDAVLVQAILSIKAIVKMDPVSHEKVIVRLVRGMDKIKEPAARSLIIWMF
GEYNFMGDLIPKIVPAVLKYLAWSFTVDVVETKLQILNASAKVVMHCPEEHAEEFKRIVA
YVIELATYDLNYDVRDRARLLSRLLPCSTTHLEPSYQPQNGDICKELADHIFDRKLQSTS
PSARNYRIYLPGSLSQVVLHAAPGYAPLPKPQSMELSHNKIIESTRGIAKPSGSNNSDAE
SGSSTYESSSVYDSESEDDGLSDGDTDGSLHHQDNQDAPVVHIYDASVQQGQTRETADEN
LADLISTDLTELMSKSALESWLDEAPAEPLVQNSSQASSARVAFTNRSFERKPKLHTLLD
SSDSNGLSVLYAFSSEVSPRSRLLVCVDLYLENVTTQHLTDITIKSEEASSSVDSTGQTL
EGSVSAPTIVPVEEIHSLAPQQTAKMVLEVHFHHHLLPLKLYVLCNGKTHPAKLHPDIAY
FVRPLPMDLNAFLCKENQLRGMFEYARRCTFKDHLEKLEHSDKNLQVAQSVASKILSNAN
VHLVSMDMPVTFNVDDTSGLCWRFSSEIPSTLKPCLITILAEGHASGPLELTAKVNSEDT
VFALNLLNRIVAIIEALTF
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcctccaggcgagcggcgcggcggcctcgtgggtggtggggcggatgggcacg
gatgcgcacctctacgatgaccctgacgacgcatccatccccgcgctcctcgactcccgc
ttcgacgccgacaaggtcgacgcactcaagcgcctcctcgccctcattgcccagggcgtc
gacgtcgcccacctattcccgcaggtcgtcaagaacgtcgcgtcgcagtcgctcgaggtc
aagaagctcgtctacctctacctcctccactacgccgacaagcgccaaaacgaagccctt
ctttccatcaacattttccagaaggatttatcagatataaacccactagtcagggcttgg
gccctgcgcaccatggctggcattagactgcatgtcgttgctcccctcgtcctggttgct
gtcaagaaatgcgccagggatccatccgcgtatgttcgaaaatgcgctgcctatgcactt
tctaagctctgcgacctgcttccggaccaagctacgactttacaggagattgtagacatc
ttgttcgacgacaattcccctggagtagtgggagctgccgctgttgcattcaagtcggtc
tgtccaacttgtctaccattgctgtcgaaacatttccggaggctatgtcagacactccct
gatattgaagaatggacacagatcattcttattgacatcctcttgcggtatgtaatagct
aggcatggcttggtcgaggattctttactctccgcttcaaatttatctacggaggttcag
ggtatcacggagtcgggtcctgttgctaccatgcccacacaacctgattctatcggcaat
ggggtttgtggtactatatcaaacatcatgctattccggcactacatcgaagaatattca
ggttttcctgacaggcaaggcaataattcgagcttttcatctgtcaccactaacatcaac
gatgacgttgcacttcttttgaagtgtacatcacctcttctatggagtcgaaatagtgga
gtcatccttgcagcagcaagtgtgcattggatcatggctcctgttggggatctgaagaga
atcattggcccgattttgtttaccctgcggtcatctcctgatgcagcatatgcgatgctt
ggcaacatactagtttttgctaagacaatgccatcattgtttgccccgttttatgaggac
ttttttataaatgcttcagatccataccagactagggctttgaagcttgaaatactgacc
actattgccacagagccatccattccagccatttttgaagaatttcaggattacattaaa
gatccagataggaaatttgtagcagatactgttgcagctattgcgttgtgcgcccagaaa
cttccctctattgccaccgcttgccttgagggacttttggcacttgtattttatgaatcg
tctatttgtaactcagttcactttgatggagaagatgctgttctggttcaagcaatcttg
tcaatcaaagcaatagtgaaaatggatccagtatcccacgaaaaggtaattgtccgcttg
gtgcgcggtatggacaaaattaaggagcctgcagcacgatccttgattatttggatgttt
ggagagtataacttcatgggagatctcattcccaagatagttcctgctgttctcaagtat
cttgcatggtccttcactgttgacgtggtcgaaactaagcttcaaatcctaaatgcttct
gccaaggttgtaatgcattgtccggaagaacatgcggaagaattcaaaaggatagttgca
tatgtcattgagttggctacatatgacttgaattatgatgtccgtgatcgtgctcgttta
ctttcaagacttttgccgtgctccacgactcacctagaaccctcataccaacctcagaat
ggcgatatttgtaaagagcttgcagatcatatatttgatcgaaagttgcagtcaacatct
ccttcagcaagaaactatcgcatttatcttccaggttccctttcacaggttgttcttcat
gcagctcctggttacgcgccacttccaaagcctcaaagtatggaattaagccataataag
atcattgaatcaaccagaggcatagccaaaccttctggaagtaataactctgatgctgaa
tctggatcttcaacatatgagagcagctctgtttatgattcggagagtgaagatgatggc
ttatcggatggggatactgatggatcccttcatcatcaagataaccaggatgctccagtg
gtacacatatatgatgctagtgtacagcaaggccagacgcgtgaaactgctgatgaaaat
ttggcagatctgatctccactgatttaactgagttgatgtctaagtcagccttggaatct
tggcttgatgaagctcctgctgagccacttgttcagaattcgtcgcaggcatcatctgcc
agagttgcttttaccaatcgcagctttgagcgaaaacctaaattgcatacactgttggac
tcatctgacagtaatggcttaagtgttttatatgccttctcatctgaggtttcgcccaga
tcacgcttgctagtatgtgtagacttatatttggagaatgttactacacaacacttgaca
gatataaccattaaatctgaggaggcttctagcagcgtggattctacaggccaaacattg
gaaggatctgtgagtgcccccactattgttcctgtggaagagatacattcattggctcca
caacaaacggccaagatggttcttgaagtccatttccatcaccatctcttgcctctaaag
ctgtatgtgctttgcaatgggaaaacacatccagcaaaacttcatccagatattgcttat
tttgttcggccactacctatggacctaaatgctttcctatgcaaggaaaaccagttaagg
ggaatgttcgagtatgctaggaggtgcacattcaaagatcatcttgagaagctagagcac
agtgataagaaccttcaagtagcccagagtgttgcatcaaaaatactgagcaacgccaac
gtgcaccttgtttcaatggatatgccagttaccttcaatgttgacgacacatctggctta
tgctggagattcagcagtgaaatcccgagcactttgaaaccttgcctaattacgatcctt
gcggaagggcatgcctcggggccactggaacttactgctaaggtgaattctgaagatacg
gtgtttgccctgaacctcctgaacagaattgtggcaatcatagaggcgttaactttttag
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