KEGG   Setaria viridis (green foxtail): 117858997
Entry
117858997         CDS       T07951                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117858997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117858997
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     117858997
SSDB
Motif
Pfam: LRR_6 LRR_At5g56370 LRR_4 F-box-like LRR_14 F-box LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 117858997
NCBI-ProteinID: XP_034598059
LinkDB
Position
5:complement(42351605..42355495)
AA seq 379 aa
MDSTKPLGGELNNSLDTLMVSSGVESKQAQNAGTETSLTGWKDLPMELLLRIMSLVGDDS
MVIVASGVCTEWRDALGWGIANLSLSWCQDHMNDLVISLAHKFTKLQVLSLRQIKPQLED
SGVEAVANYCHDLRELDLSRSFRLSDRSLYALAHGCPHLTRLNISGCSNFSDAALVFLSS
QCKDLKCLNLCGCVRAASDRALQAIACNCGQLQSLNLGWCDGITDKGVTSLASGCPELRA
LDLCGCVLITDESVVALANGCPHLRSLGLYYCQNITDRAMYSLAANSRVRSQGRGWDAAK
RGSGKDRDRDGLASLNISQCTALTPPAVQAVCDSFPALHTCPERHSLNISGCLSLTSVHC
ACALHPHRAGRAILSNHAY
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggatagcacgaagccactgggaggggaattgaacaattcgctcgatactcttatggtt
tctagtggtgtggagagtaagcaggctcagaatgctggcaccgaaaccagcttgacaggt
tggaaagaccttcccatggagctgctcctgcggattatgtcattagttggagatgacagc
atggtcatcgtggcctctggtgtatgcacggaatggcgtgatgcgttaggttggggaatt
gcaaatctttcactatcatggtgccaggaccacatgaatgacttggtgatatctctggct
cacaaattcacgaagcttcaagttctatctctacggcagatcaaacctcagctcgaagac
agtggtgtggaagctgtggcaaactactgccacgatctgcgggaactggatctcagcaga
agctttaggcttagtgaccggtccttgtatgctctggcacatgggtgccctcacctcaca
aggctcaacatcagcgggtgctccaatttcagtgacgctgctttagtgttcctcagtagc
cagtgcaaggatctcaaatgcctgaatctgtgcgggtgtgtgagggcagcttctgacaga
gcgcttcaggccatcgcttgtaactgtggccagctgcaatccttgaacctgggctggtgc
gatggcatcactgacaagggagtgaccagcttggcgtcagggtgccctgaactccgggct
ttggacttgtgtggctgtgttctcatcacagatgagagcgtagtggcgctagcgaacggc
tgccctcacctgcgttccctggggctgtactactgccagaacatcacggaccgcgccatg
tactcgctggccgccaacagccgcgtgaggagccagggccggggctgggacgcggcgaag
aggggcagcggcaaggaccgggaccgggacgggctagcgagcctgaacatcagccagtgc
acggcgctgaccccgccggcggtgcaggccgtgtgcgactcgttcccggcgctgcacacg
tgcccggagcggcactcgctcaacatcagcgggtgcctcagcctcacctccgtgcactgc
gcctgcgccctccacccgcaccgcgccggccgtgccatcctctccaaccacgcctactga

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