Setaria viridis (green foxtail): 117859022
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Entry
117859022 CDS
T07951
Name
(RefSeq) dnaJ protein P58IPK homolog A
KO
K09523
DnaJ homolog subfamily C member 3
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117859022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svs03110
]
117859022
Chaperones and folding catalysts [BR:
svs03110
]
Heat shock proteins
HSP40 / DNAJ
117859022
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Gene cluster
GFIT
Motif
Pfam:
DnaJ
TPR_2
TPR_1
TPR_14
TPR_19
TPR_16
TPR_11
TPR_9
TPR_8
TPR_12
TPR_17
ARM_TT21_N
Alkyl_sulf_dimr
TPR_CcmH_CycH
TPR_15
TPR_Slam
BTAD
UBact
Motif
Other DBs
NCBI-GeneID:
117859022
NCBI-ProteinID:
XP_034598081
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Position
5:46485620..46489544
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AA seq
472 aa
AA seq
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MVRAWGRAALPPLLILCLLHLQYSPLVVAQEGQEKDPATLFARASEMMNLRKYDGALGLL
NAVLEVDPNHSEAYRQRASVLRHKCRYKEAESDYNKYLELNPATASVEKELSQLLQAQNS
LQSAYGQFDSGDFSKVLEYINKIVLVFSPGCLKAKLLKAKALLALKDYSSVISETGFILK
EDEDNLDALLLRGRAYYYLADHDVASRHYQKGLRLDPEHSDLKKAYFGLKNLLKKTKSAE
DNAARGKLRVSAENYKAALAMDPDHTAYNVHLYLGLCKTLVKLGRGKEAISSCTEALNID
SDLVDALTQRGEAKLLSEDWEGAVQDLKEAAQKSPQDMGIREALMRAEKQLKLSKRKDWY
KILGISKTASAAEIKRAYKKLALQWHPDKNVDKREEAENMFREIAAAYEVLGDEDKRVRY
DRGEDIDEMNMGGGGGGGFNPFGGGGQQYTFHFDGGFPGGGFPGGGGFQFNF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggcatgggggcgggcggcgctgcctccgctcctcatcctctgcctcctccac
ctgcagtactccccgctggtcgtcgcccaagaaggtcaagaaaaagaccctgcaactctg
ttcgcacgagcctcggagatgatgaacctgaggaaatatgatggggcgcttggcctgcta
aatgctgtgctggaagttgacccaaatcattctgaagcttacaggcaacgtgcatctgtg
cttcgtcataagtgcagatacaaggaagctgagagcgactataacaaatacctggagcta
aatcctgcgactgcttcagtggaaaaggaattatctcagcttctgcaggctcaaaattca
ttacagtctgcttatggtcagtttgattccggagacttttcaaaagtcctggaatacatc
aacaaaattgtgctcgtcttttctccaggttgcttaaaggcaaagcttctcaaggctaaa
gcgttgctagcactgaaagattactcaagtgttatttcagagactggatttatcctaaag
gaagatgaagacaacttggatgcgctgctactacgtggtcgcgcctactattaccttgct
gatcatgatgtggcctctaggcactaccagaaagggcttcgtcttgatccagagcattca
gatttgaagaaagcatatttcgggttgaaaaatcttttgaagaagactaagagtgctgaa
gataatgctgccaggggtaagctacgtgtgtctgctgagaactacaaggcagctctagca
atggatcctgaccatactgcttataatgtacatctttatcttgggttatgtaaaactctg
gttaaacttgggagaggtaaggaggccatcagcagttgtactgaagcactcaacatagac
agcgatcttgttgatgcacttacacagagaggtgaagctaaacttctctcagaagattgg
gaaggagcggttcaagatctaaaagaggccgcccagaaatctccacaggatatgggcatc
cgcgaagcacttatgagagctgaaaagcagcttaagttgagcaaaagaaaagactggtac
aaaatccttggtatttcgaagacagcatcagctgcagagataaaacgtgcctacaaaaag
ctggcattgcagtggcatccagataaaaacgttgataagcgggaggaagcagaaaacatg
tttcgagaaattgccgctgcttatgaggtgcttggtgatgaagacaaacgtgtaaggtat
gaccgtggagaggatatcgacgagatgaatatgggaggcggcggcggcggtggcttcaat
ccttttgggggaggcggccagcagtacacgtttcatttcgacggtgggttccccggcggc
ggcttccctggaggtggaggctttcagttcaacttttga
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