Setaria viridis (green foxtail): 117859115
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Entry
117859115 CDS
T07951
Name
(RefSeq) myosin-17-like isoform X1
KO
K10357
myosin V
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117859115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117859115
04131 Membrane trafficking [BR:
svs04131
]
117859115
03029 Mitochondrial biogenesis [BR:
svs03029
]
117859115
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
svs04812
]
117859115
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117859115
mRNA cycle factors
P-body specific factors
117859115
Membrane trafficking [BR:
svs04131
]
Others
Actin-binding proteins
Myosins
117859115
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117859115
Cytoskeleton proteins [BR:
svs04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117859115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
TRPM_tetra
AAA_16
Motif
Other DBs
NCBI-GeneID:
117859115
NCBI-ProteinID:
XP_034598193
LinkDB
All DBs
Position
5:complement(34545835..34567476)
Genome browser
AA seq
2386 aa
AA seq
DB search
MASMLNIVIGSHVWVEDKDLAWVDGEVFRIDGQNAHVRTTKGKTVIANISDIHPKDTEAP
PGGVDDMTRLSYLHEPGVLDNLAVRYAKNIIYTYTGNILIAINPFQRLPNLVDSRTMEKY
KGANLGDLDPHVFAIADVSYRQMINEGKSNSILVSGESGAGKTETTKLLMRYLAFLGGRS
GTGERTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGKISGAAIRTYLLE
RSRVCQINSPERNYHCFYFLCAAPSEDLKKYKLGDPSSFHYLNQSACIKVDGINDAEEYL
ATRNAMDTVGITEQEQEAIFRVVAAVLHLGNINFAKGREVDSSVIKDDKSRFHLNTAGEL
LMCDCGKLENALINREINTPEGVITTTVGPNSATISRDGLAKQIYSRLFDWLVNRINASI
GQDPDSNKLIGVLDIYGFESFKTNSFEQLCINFTNEKLQQHFNQNVFKMEQEEYTREQIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETLSQKLYEKFKNHKRFTKPKL
SRTAFTIQHYAGDVTYQSDQFLDKNKDYVVAEHQELLNASKCSFVSVLFPPATEENTKSS
KSSIASRFKMQLHELMETLSSTEPHYIRCIKPNSVLKPAIFENTNVLQQLRCSGVLEAIR
ISCAGYPTRKLFHDFLHRFRVLAPEILKEKNDEKVACQKILDKIGLQGYQIGRTKVFLRA
GQMAELDARRTEMRNNAARGVQSQYRTHVAREQFLVLRDASICLQSFVRARLACKQHEFL
RQQAAALRIQKTTRWYFAWKTYCQLRLSAVTLQAGLRAMAARNEFNFRKRNKASVHIQSQ
WRCHRDYSNYMKLKRAALTYQCAWRRRVARKELRKLRMAARDTQALKVAKEKLEERVEEL
TSRLGLEKKLRADLEKSKEEEVSKLKVALHEMEQRVEEVKAMQEQESAKKAVEEALAQER
EKISLLTTEIEGLKALLVAEREENDVARKAHANALEMNEELNKKVSDADEKIKQFNDTVQ
RLEGTIREGETLLLTERQQNEAASATLAESQARNGALVSKLEDAVKQNDLLQETVQRFEE
AMKNLESSLTFEKQQHEASLVELAEAREKIEELQREVGDTDEKSTLLQTAIQSLEERLRE
KEALLATERQESEATKKSLSESEDRNQELLMKTEVAEKEIAHFQETIQRHEENMAALETS
LRSERQQNDAIMKQQADSQAEIGELQRKLEDADGRNKLLQDSLQRLEEDATAREALMVTE
RQENEVTKKTLTEALDQIEELVKEVECANHSVHQLQDSIQRLEQSAVAREATLLTERQEK
DAISKALAEAQGRIEGLLKEIYSASRKTDQLQNTIERLEEGATTTDALYLEEKQEHDQTK
KSLSEAQEINKELLTKIEEAEKNIDQLLENVERLEKDTTARESILLTTKQSYDETAKLLL
ESQERNQELMHIVEDSASKIVLLEDSVKRLEESTADKDSLLAIERHENSETKKELAGSQK
KIEELLTEVQDTRTCIAELEESVRRLEGNLGVTEALLLTEKEQNASTLKLLSEAQLRIED
LIKKLEGADRKSDSLQDTITRLEQEATAKEALLLTEKQAHEATRKTLSEVQERNEELLKN
IHDNDKHILQLQFTIQRLEETTVANENLLLREREQNDATSKAHVESQEKYEELLKKFVDV
DRKIDLLQGTIERLGENTTTKDALLLSERHEKDAVKKALTEADEKNEELLMKVEDANEKI
EHLQTMIIKLEDNVAAKDVSLEAAMKENDTIRKSLTEAQERNDELLKKISDSEYRIHLLQ
DTVQKLQVDAISRLSSFVMEKQESDAAKRAVTEAHERNEDLLKRNEDLLKRNDDLIKKIE
ESNKIVIQLQEALQRIEGKAANLEAENQALRQQATATPPSTAKSPASRSKITRIHRSPEN
GHILNGDMRQTEMKPSTSTSEAITSAGNVPDSGDQKEFEHGEKLQRIPRQKYQPSHHQQP
QDDQQWLLTCISQYLGFSGSKPVAALLIYQCLLHWKSFEAMKTGVFDSILHAINSATEAQ
NDMRTLAYWLSNLSTLTVLLQRSFKTTRTAISTPRRRFSSERIFHGNQAPNAGLAYLSGQ
SAVGSAGLLQVEAKYPALLFKQQLVDLIEKVYGMISDSVKKELNPLLELCIQDPRTSHSS
LAKGHLNGMGQQNQLTHWLGIVKILTSYLDVLKANHVPSILVHKLFTQIFSLIDVQLFNR
LLLRRECCSFSNGEYVRAGLAELKHWSDNATREFAGSAWEALRHIRQAVDFLVISLKPMR
TLREIRTDVCPALSIQQLERIVSMYWDDVNGTNTISAEFTSSLKSAVREESNMATSFSIL
LDDDSSIPFSLDDITKTLPAIEVADDDLLPFVHENPSFAFLLQRGE
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgatgctaaacattgttataggctctcatgtatgggtggaagataaagattta
gcctgggttgatggtgaggtattccgaattgatggtcaaaatgcccatgttcgcacaacc
aaggggaagacggtcattgcaaatatatcagatatacaccctaaagacacagaagcacca
cctggtggagtggatgacatgacaaggctatcatacttgcatgagcctggagttttagat
aacctggctgtcagatatgcaaaaaatatcatttatacctacactggcaatattctgatt
gcaataaatccattccaaaggctgcctaatctggttgattcccgtactatggaaaaatac
aaaggtgcaaatcttggtgacctggatcctcacgtatttgcaatagctgatgtctcttac
aggcaaatgataaatgaaggaaagagtaactccattttggtcagtggtgaaagtggtgct
ggtaagactgaaactacaaaattgttgatgagatatcttgcattcctgggtgggcgatct
ggaacaggagagaggacagttgaacaacaagttttagaatctaatccagtccttgaagct
tttgggaatgcgaaaaccgttcggaacaacaactcaagtcgatttggtaaatttgttgaa
atccagtttgacaagagcggaaagatatctggtgctgccattaggacttacttgcttgag
agatctcgagtctgccaaattaatagcccagagagaaactaccattgcttttacttcctg
tgtgccgcaccatctgaggatcttaagaagtataagcttggggacccatcttcatttcac
tatctcaaccaatcagcttgcattaaagttgatggaatcaatgatgctgaggaatatctt
gcaacaagaaatgcaatggatactgttggcatcactgaacaagaacaggaagctatattc
cgggttgttgctgctgtgcttcatcttggaaacataaattttgcaaaagggagagaggtc
gattcatctgtaataaaggatgacaaatctagattccatcttaatacagcaggagagctc
ttgatgtgtgattgtgggaagttggagaatgccttgataaatagggaaattaatacacca
gaaggagtgattaccactacagttggtccgaattctgctactattagccgggatggttta
gcaaagcagatatactctcgattatttgactggcttgtaaacagaataaatgcatcaata
ggacaagacccagactcgaacaaactgattggggtacttgatatatatggttttgaaagt
tttaaaaccaacagttttgaacaactgtgcatcaatttcaccaatgaaaaactccagcaa
cattttaatcagaatgtcttcaaaatggaacaagaggaatacacaagggagcagattaat
tggagttacatagagtttgttgacaatcaagatgtacttgacttgattgaaaagaaacca
ggtggcattattgcacttcttgatgaagcctgcatgtttccaaagtccacacatgagaca
ttgtctcaaaagctgtatgaaaagttcaagaaccacaaaaggtttaccaaaccaaagctt
tctcggactgcattcacaattcaacattatgctggagatgtaacatatcaatctgatcaa
ttcctggacaagaacaaagactatgtggttgcagagcatcaagaattacttaatgcttct
aagtgctcttttgtatcagtgttatttccaccggcaacagaagagaacacaaaatcatca
aagtcctcgatcgcatctcgctttaagatgcaacttcacgagctcatggagactttgagc
tctacagagccacattacatcagatgtataaagccaaatagtgtccttaagcctgctatt
tttgagaacactaatgttcttcagcagcttcgatgctcgggtgttcttgaagccattagg
atcagctgtgctggttatcccacgaggaaactattccatgattttctacatcgctttcgt
gtccttgctcctgaaattctgaaagagaaaaatgatgaaaaggtcgcctgccaaaagatt
ttggacaaaataggactgcagggttatcagataggaagaactaaggtattcctgagggct
ggtcaaatggctgaactggatgctagaagaacagagatgcgaaataatgcagcaagaggc
gttcaaagtcaataccgtacccatgtcgctcgtgagcagttcctagtactacgagacgca
tctatttgtttgcagtcttttgttagagcaagattggcttgtaaacaacatgaattcctg
agacagcaagcagcagcattgagaattcagaaaaccaccagatggtattttgcctggaaa
acttattgccaactgcgcttgtcagccgttacattgcaggcagggctaagggccatggca
gctcgcaatgaattcaacttcagaaagagaaataaagcttcagtccatatccagtcccaa
tggcgctgccacagagattactcgaattatatgaagttgaagagggcagcactaacatat
cagtgtgcttggcgaagaagggttgctaggaaggagttgcggaagctcagaatggctgca
agagatacacaagctctaaaggtggcaaaagagaaacttgaggaacgtgtggaagagcta
acaagccgcctgggcctagagaagaaactaagggctgatctggagaagtccaaagaagaa
gaagtttcaaaactgaaggttgctcttcatgagatggagcagcgagttgaagaagtcaaa
gcaatgcaggaacaagaatcagctaaaaaggctgttgaggaagctctagctcaagaaaga
gaaaagatcagtttgttgactactgaaattgagggcctcaaggcactgctagtagctgaa
cgagaggagaatgatgtagcaaggaaagcacatgccaatgctctggaaatgaatgaagag
ttaaataagaaagtcagtgatgcagatgaaaagatcaagcaatttaatgatactgtacag
agactagaagggactataagagaaggagagacccttttgctaactgaaagacaacaaaat
gaagcagctagtgctacacttgctgaatctcaagcaagaaatggagcattggtaagcaag
cttgaagatgctgtgaaacaaaatgatctcctccaggaaactgttcaaagatttgaagaa
gccatgaaaaatctggaatcttctctaacatttgagaagcaacagcacgaggcaagtttg
gtagaactagctgaagcacgagaaaaaattgaagaacttcaaagagaagttggggacact
gatgaaaaatccaccctgcttcagactgctatacaaagccttgaagaaagattaagggag
aaggaggctctattggcaacagaaagacaagaaagtgaagcaactaagaagtcgcttagt
gaatctgaggatagaaaccaggagttacttatgaaaactgaagtcgctgaaaaagaaatt
gctcatttccaagaaactatccaaagacatgaagaaaatatggcagcactagaaacttcg
ttgagatctgaaaggcagcaaaatgatgcaatcatgaaacaacaagctgactctcaggcg
gaaataggagagctgcaaaggaagcttgaagatgctgatggaagaaacaagcttcttcaa
gattctttacagagacttgaagaagatgctactgcacgagaggctttaatggttactgaa
aggcaagaaaacgaagtgacaaaaaagacactaacagaagctctggatcaaatcgaggaa
ttagtcaaagaagttgagtgtgctaaccacagtgtgcatcagcttcaagatagtatacag
agactggaacagagcgcagttgcaagagaggcaactttactaacagaacgtcaggaaaaa
gatgcaatatcaaaagctttagcagaggcacaaggaaggatcgaaggtttactgaaggaa
atttattctgctagtagaaaaaccgatcaacttcaaaatactatagaaaggttagaagag
ggtgcaacaacaacagatgctctttacttagaagaaaagcaagagcatgaccaaacgaag
aaatcactctctgaagctcaagagataaacaaggaattactaacgaaaattgaggaagct
gagaaaaacatagatcagcttctggagaatgtggaaagactggaaaaagatacaactgca
agagagtctatactgcttacgacaaagcaaagttacgatgagactgcaaaattgctactt
gaatctcaagagagaaaccaagagttaatgcacatagtagaggactcagcaagcaaaatt
gttctgcttgaagactcagtaaaaagacttgaagaaagtactgcagataaagattcttta
ttggctatagaaaggcacgaaaacagtgaaaccaagaaagaattagctggttcgcagaaa
aagattgaggaattgctaactgaagtgcaagatacccgtacatgtattgcagaacttgag
gaatcggttaggagacttgaaggcaatttgggagtaactgaagctttattgctaactgaa
aaggaacagaatgcttctactttaaaattactttcagaagcacaattgagaattgaagat
ttaataaagaaacttgaaggtgcagatagaaaatctgatagccttcaggatacaataaca
agacttgaacaagaggccactgccaaagaggctttattgcttactgaaaagcaggcacat
gaggcaacaaggaagactctcagtgaagttcaggaaaggaatgaagaattgctgaagaat
attcatgataatgataaacatattcttcagcttcagtttactatacagaggcttgaggaa
actacagttgcgaatgagaatttgctgttgagagagagggagcagaatgatgcaacatca
aaagcgcacgttgagagtcaagaaaaatatgaagaattactaaagaaatttgttgatgtt
gacaggaaaattgaccttcttcaaggtaccatagaaaggcttggagaaaatacaacaaca
aaggatgctctgctgctatcagagaggcatgaaaaggatgcagttaaaaaagcacttact
gaggctgatgagaaaaatgaagagttactgatgaaagttgaagatgctaatgaaaaaatt
gaacaccttcaaactatgattattaagcttgaagataatgtagctgcaaaagatgtttct
ttggaagctgcaatgaaggaaaatgacacaatcaggaaatctcttactgaagctcaagag
agaaatgatgaattactcaagaaaattagtgacagtgaatacaggatccacttacttcaa
gacactgtacaaaagcttcaagtagatgcaatatcaagattgtcttcttttgtaatggaa
aaacaagaaagtgatgctgcaaaaagagctgttactgaagctcatgaaagaaatgaagat
ttactgaagagaaatgaggacctcctcaagaggaatgatgatttgattaagaaaattgaa
gagtctaataaaattgtcattcaacttcaggaagctctacaaagaattgaaggaaaagca
gccaacttagaggctgagaaccaagctcttcgtcaacaagcaactgcaactccaccatct
actgctaaatctccagcttcacgctcaaagatcacaaggatccatagaagtccagagaat
ggccatattttgaacggtgacatgaggcaaactgagatgaagccgtcgactagcacatca
gaagcaataacatcagcaggcaatgttcctgactcgggtgaccaaaaggaatttgaacat
ggagaaaaactgcaaagaataccaagacagaaatatcagccttcccatcaccagcagccc
caggacgatcagcagtggttactcacctgtatttcacaatatcttggattttctgggagc
aaacctgttgcagctctccttatataccaatgtcttctccattggaaatcatttgaagca
atgaagacgggtgtctttgacagcattttgcatgctataaactcagccacagaggctcaa
aatgatatgagaacattggcgtattggttgtccaacttgtctacgttaacagttctcctt
caacggtcattcaaaactactaggacggcaatctcaactccaaggagaagattttcatca
gagcggatctttcatggaaatcaagctccaaatgctgggctggcttatctcagtggacaa
tcagctgttggttctgctggattgcttcaagttgaagcaaaatatccagctttgctattc
aaacagcagcttgtggatctaattgaaaaggtttatggtatgataagtgacagtgtgaag
aaggagctaaaccctttgcttgaattgtgtatacaggatccacgaacttctcactcaagt
cttgcaaaaggccatcttaatggcatgggtcaacagaaccaactcacacactggttgggc
attgtgaaaatcctcactagctacttggatgtactgaaggcaaatcatgttccatcaatt
ttggtgcacaaacttttcactcaaatattctcactgattgatgttcaactatttaaccga
ttacttttgcggcgtgagtgctgttcatttagtaacggggaatatgtcagagctggacta
gctgaactaaaacattggtctgacaatgctactagagagtttgcaggttcagcatgggag
gctttgaggcacatcagacaagctgtcgatttcctggtgatttctcttaagccaatgagg
acattaagagagatacgcactgatgtgtgccctgccctcagcatacaacagctagagcga
atagttagtatgtactgggatgatgtgaatggtacaaacactatttcagcagagtttaca
tcgagcttgaaatctgctgtacgtgaggaatcgaatatggccacaagtttttctatactc
ctagatgatgattccagtatacctttttcacttgatgatattacaaagacattgccagcc
attgaggtggctgatgatgacttgctgccttttgtccatgaaaacccaagctttgcgttt
ttattgcaaagaggggagtag
DBGET
integrated database retrieval system
