Setaria viridis (green foxtail): 117859232
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Entry
117859232 CDS
T07951
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00130
Ubiquinone and other terpenoid-quinone biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01240
Biosynthesis of cofactors
Module
svs_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
117859232
Enzymes [BR:
svs01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
117859232
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
117859232
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
117859232
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
117859232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
Abhydrolase_1
TPP_enzyme_M_2
Abhydrolase_6
TPP_enzyme_N
Hydrolase_4
TPP_enzyme_C
Thioesterase
Abhydrolase_2
Abhydrolase_3
Ndr
Abhydrolase_11
Abhydro_lipase
DLH
Mbeg1-like
Esterase
BAAT_C
MenC_N
LIDHydrolase
Ser_hydrolase
Lipase_3
Motif
Other DBs
NCBI-GeneID:
117859232
NCBI-ProteinID:
XP_034598332
LinkDB
All DBs
Position
1:28871361..28885212
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AA seq
1700 aa
AA seq
DB search
MLAVSPHPRLPLLPGVCPILSFPFQFPCRRYRSTTSRLRCGLRPLCRLRTDAMAGRRAGI
VIDVDKVAETGDLDLPVDVSFTRRLPPALTVGDGLDALRRAAAEVKASPPAGARSGVIRF
EVLVPPSTKALKWCSQFRGSSLFPQFYLSRKLTSCPSFQLETCGIGSAICLHGSYLGKHG
FDLVLRYISSDSHLIRAYGFVGMKYDEELSSIEEKLGSYYFFIPQVELSEFDSCSILSST
MVWDDSVSHTFKDAVSLFESCFDQIQNSYDSSDNICHKGLVPSYISGDAHLSETGNPQLV
YLDAELLATIDAKADVLKEKFLTSDQSFVRFSPQFFFCSNMDLCLQHKTESFIKGSSNIN
LVWASLIVEECVRLGFTYFCIAPGSRSSALALSATCHPLTTCISCYDERSLGFHALGYGR
GSRKPAVVITSSGTAVSNLLPSVVEASEDFIPIILLTADRPPELHDAGANQAINQVNHFG
TFVRYFFNLPPPTDQIHARMVLTTLDSAAYYAMQAPQGPVHINCGFREPLDYTNRDWNID
CLRGLDKWFLNSEPYTRYLIMKTVSAFGNYSSSVMEILEIVEKADQGLLLVGALHTDDDM
WAVALLARHLSWPIATDILSGLRLRKAVNLVPGLDKSILFIDYIDQILLSDSAKNWISPD
VVVQIGSRITSKRVGMFLETCFPSSYILIDRHPCRHDPSHVVTHRIQASVVEFAASLCHC
NFPRKTSRWTDILMVVNSVVSQEIMFQIHSKCSLTEPYVAQVIGESLYGDAIIFVGNSMV
IRDLDMFGKGWTDYTTNGNSMIMHHFPDFVGTTVAGNRGASGIDGLLSTAIGFAVGSNKH
VFCVVGDMSFLHDTNGLALLNQRAPRKPMTIIVVNNHGGAIFSFLPIAENTSPQILKKFF
YTSHDISISNLCAAHRVKHFLVQTKAELHDALVKSKEEQIDCVVEVDNSIDSNANFHRIM
NMFSAYSTTLYLDYLLGAPYFKSELNDMPVDTIHGAEYMLYRIQLSAPRTSGLSDDRFSH
EGIILKLHVDDNIAGFGEVAPIEIHEEDLLDVEEQLRFIFHMMKDCVLDVIPLLKGSFSN
WIWTSLGIPPSSIFPSVKCGLEMAILNLLASQRKCGWSKVLAGSDPLVQDQNSSASIEIC
ALVDCNGTPMEVALAVAKLVAEGFTTVKLKVGRRESPIEDAAVLHKIREVVGYQINIRVD
ANQKWTYEQAVEFGSRAKGLRLEYIEEPVSSVNDLIKFCDKSGLPVALDETIDNLKGDVI
PKLHQFVHPGIVALVIKPSVVGGFENAAHIAKWAQMHDKMAVISSAYESSVGLASYIQLS
HYVDQQNSIVSRIKNKGTCGVAAHGLGTYKWLREDVSEQKLNIHATPLGDGIRTSVEDAH
RYLHHLNISSNKIERTYSEEKLRSYSIQVDVDDCSYIVKLQEAGDHTNEKVVLLLHGFLG
TSDDWVPMMKALSPSARVIAVDLPGHGESQMLQHHVENSEQYLVTVQSVADLLLKLVGQI
TDGEVVVVGYSMGARIALHMALNQVHQIRGAVIISGSPGLRDEESRRRRIAVDGSRAKFL
MSCGLDCFLETWYSAKMWTSLREHPKFNSLVRTRSKHKNIKALAKVLADSSVGRQKSLWE
DLKHLKRPLLIVAGEKDTKFKDISQRMCSEITQHAECGSGGRDGNELCDVIIIPDSGHAV
HVENPLPLVRAVRKFLQKLH
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgtctcgccccatccccgcctccctctactccccggcgtctgccccatcctc
tcttttcccttccagttcccttgccgccgctaccgctccaccaccagccgcctccgctgt
ggtctccgccccctctgtcgcctccgcacggacgccatggccgggcggcgcgcgggcatc
gtgatcgacgtggataaggtggcagagaccggcgacctagacctccctgtggatgtatcg
ttcacgaggaggcttccccctgcgctcactgtcggtgacggtctcgacgcgctgcggcgg
gctgcagctgaggtcaaggccagcccgcctgctggcgccaggagcggcgtgatcaggttc
gaggtacttgttccacccagtacaaaggcgcttaagtggtgctctcagtttaggggatca
tcattgtttcctcagttttatttatcgaggaagctaacctcttgtccatcatttcaactt
gaaacctgtggcattgggtctgcaatttgcttgcacggttcctacctaggaaaacatgga
tttgatttagtattgagatatatttcttctgattcacacttgataagggcttatggattt
gtaggcatgaaatatgacgaggaattgtcgtccatagaggagaaacttggctcatattac
ttcttcatccctcaggttgaattgagcgagtttgatagttgttccatactatcatcaacc
atggtttgggatgactctgtttctcatacattcaaggatgctgtttctttatttgaatct
tgctttgatcagatacaaaatagctatgattcttcagacaacatttgtcacaaaggtctg
gtaccgagttacatttctggagatgcacatttgtcagagactgggaatcctcagctggtg
tatttggatgcagaactgctcgccacaatagatgccaaagctgatgtgctaaaggagaag
tttctgacttctgaccagtcttttgttagattttcaccacagttcttcttttgttcaaac
atggacttatgcttgcaacacaagacagaatctttcatcaagggctcctctaacataaat
ttggtatgggcatcccttatagttgaagaatgtgttaggcttggtttcacgtacttctgt
atagctccaggttcaagatcatccgcacttgcactttctgctacatgccatcctttgaca
acatgcatatcatgttacgatgagcggtcacttggatttcatgctcttggctatgggaga
ggttctcgaaaaccagcagtagtaatcacatcatcaggaaccgctgtatcaaatcttctt
ccttcagtggtcgaggcaagtgaagatttcataccaattatattactcacagctgatcgt
cctcctgagttgcatgatgctggagctaaccaagccatcaatcaggtcaatcattttggt
acctttgtaagatatttttttaatctccctccacctactgaccaaattcatgcaagaatg
gttctcactacacttgattcagcagcctactatgcaatgcaagctccacaaggcccagtg
catataaactgtggttttagagaaccactagattacactaatcgagattggaatattgac
tgtttgagaggtttggataagtggtttttaaatagtgaaccatataccagatacctaata
atgaaaacagtttctgcattcgggaattattctagttcagtaatggagattctggagatt
gtagagaaggcggatcaagggcttctattagttggtgctcttcatacagatgatgacatg
tgggccgtggctttactagctaggcacctttcctggccaattgctactgatattctgtct
ggactgcgattgcggaaagcagtaaatttggtcccagggcttgataagagcattttattt
atagactacatcgatcaaattctattgtctgattctgctaaaaactggataagcccagat
gttgttgttcagattggcagccgtattactagcaaacgagtgggaatgtttctcgagact
tgcttcccatcttcctacattttgattgacaggcatccatgccgtcatgatccttcacat
gttgtcacccacagaatacaagctagtgtagtggaatttgctgctagtttgtgtcattgt
aattttccaaggaagacaagcagatggacagatattttgatggttgttaattcagtggtt
tctcaggagataatgtttcagatacattcgaaatgctcacttacagaaccatatgttgct
caagtaattggggagtcactttatggtgatgctatcatatttgttgggaacagcatggtc
atccgagacttagacatgtttggcaagggttggactgattacactacaaatggaaatagc
atgataatgcatcattttccagactttgttggcacaacagtggctgggaacagaggagca
agtggcattgatggtttgctcagcacagcaattggatttgcggttggatcaaacaagcat
gtattctgtgtggttggcgacatgtcctttcttcatgacacaaatggattggcacttctc
aaccaaagggcaccgaggaaacctatgacgataatcgttgttaacaatcatggtggtgca
atcttcagctttctaccaattgcggaaaatacttcaccacaaattttgaagaaattcttc
tacacatcgcatgacatatcaatttccaacctctgtgctgcacacagggtaaagcatttt
ctagttcaaacaaaagcagagcttcatgatgccttggtgaaatccaaagaggaacagatt
gattgtgtggtagaagtagacaatagcattgatagcaatgccaactttcatagaattatg
aatatgttctctgcctattctacgactctgtatctggattatcttctgggagctccatat
tttaagagcgagttaaatgacatgcctgttgatacaattcacggagcggaatacatgctg
tacagaatccagctttctgcaccacgtacttcagggctttctgatgacagattctctcat
gaaggaattattctgaagcttcatgtggatgataacattgcaggatttggagaggttgca
ccaattgaaattcatgaggaggatctgttggatgtcgaagagcaacttaggtttattttc
cacatgatgaaagattgtgtgctagatgttattcctttgctgaaagggtctttctccaat
tggatatggacaagccttgggattcctccttcttcaatattcccaagcgttaaatgcgga
ttggagatggccattctcaatttacttgcatcacaacggaaatgtggatggtccaaagtt
cttgctggttccgaccccttagtacaagatcagaacagttctgcaagcatagagatatgt
gcattagtagactgcaatggtactccaatggaagtagcacttgctgtagccaaactggtc
gctgaaggttttaccacagttaaactgaaggttgggcgtcgtgaaagccccattgaggat
gcagctgtccttcataaaataagagaagttgtagggtaccaaatcaatatccgtgttgat
gcaaaccagaaatggacatatgaacaggcagttgaatttggatcaagagcaaaaggcctt
cgtttggaatacattgaggaaccagtgagctctgtaaatgatctcatcaagttctgtgac
aagagtggcttgcctgttgcactagatgagactattgacaaccttaagggagatgtaatc
cctaagcttcatcaatttgtgcatccaggaatagttgctcttgttattaaacccagtgtt
gttggtggttttgagaatgcagctcatatagcaaaatgggctcagatgcatgataagatg
gctgtcatcagtagtgcatatgagagttctgtaggtttggcatcctatatacagttatca
cattatgttgaccaacaaaactccatagtctccagaataaagaacaaaggtacatgtggg
gtggccgctcatggacttggaacatataaatggttaagggaagatgtatcagagcaaaag
ttaaatatccatgcaaccccacttggtgacgggattcgaacttcagtagaagatgcccat
cgttatcttcaccatttaaatataagcagcaataagatagaaaggacatatagtgaagaa
aaactgaggtcatattctatccaagttgacgtggacgattgttcttatatagtcaaactt
caagaggccggtgatcatacaaatgaaaaggttgttcttttacttcatggatttcttggt
acgagtgacgactgggttcccatgatgaaagctctctcccccagtgcacgggtcattgct
gttgatcttcctggtcatggcgagtcacaaatgctgcagcatcatgttgaaaattcagaa
caatatctggttacagttcaatcagttgcagatttgttgctaaagttggtaggtcaaata
actgatggtgaggtggttgttgttggctattcaatgggtgcaaggattgcactccatatg
gcactaaatcaagttcaccagattcgtggagctgtgatcatatcaggaagtcctggattg
agagatgaagaaagtagaagacgtcgtattgctgttgatggatcaagagctaagttcctg
atgtcctgtggactcgattgctttctggagacatggtactcagcaaaaatgtggaccagt
ctacgagagcatccaaagttcaattctttagtgaggacacgcagtaaacacaagaacatc
aaagctctagctaaggttcttgcagactcaagtgtggggagacaaaagtccctgtgggaa
gacttgaaacacttgaagaggcctctactcatcgttgcaggtgaaaaggacacgaaattt
aaagacatctcacagagaatgtgcagcgagataacacagcacgctgagtgtggatctggt
ggtcgggatggaaacgagctctgtgacgtgatcatcatcccagatagcggccacgctgtg
catgttgagaaccctcttcctttggtaagggccgtgaggaagttcttacagaagctgcac
tga
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