Setaria viridis (green foxtail): 117859232
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Entry
117859232 CDS
T07951
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X2
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00130
Ubiquinone and other terpenoid-quinone biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01240
Biosynthesis of cofactors
Module
svs_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
117859232
Enzymes [BR:
svs01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
117859232
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
117859232
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
117859232
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
117859232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
Abhydrolase_1
TPP_enzyme_M_2
Abhydrolase_6
TPP_enzyme_N
Hydrolase_4
TPP_enzyme_C
Thioesterase
Abhydrolase_2
Abhydrolase_3
Ndr
Abhydrolase_11
Abhydro_lipase
BAAT_C
DLH
Esterase
LIDHydrolase
Lipase_3
Motif
Other DBs
NCBI-GeneID:
117859232
NCBI-ProteinID:
XP_034598332
LinkDB
All DBs
Position
1:28673991..28688460
Genome browser
AA seq
1730 aa
AA seq
DB search
MNLIPFRLKPKRPLPPPLRFRLFRLLPTAGMLAVSPHPRLPLLPGVCPILSFPFQFPCRR
YRSTTSRLRCGLRPLCRLRTDAMAGRRAGIVIDVDKVAETGDLDLPVDVSFTRRLPPALT
VGDGLDALRRAAAEVKASPPAGARSGVIRFEVLVPPSTKALKWCSQFRGSSLFPQFYLSR
KLTSCPSFQLETCGIGSAICLHGSYLGKHGFDLVLRYISSDSHLIRAYGFVGMKYDEELS
SIEEKLGSYYFFIPQVELSEFDSCSILSSTMVWDDSVSHTFKDAVSLFESCFDQIQNSYD
SSDNICHKGLVPSYISGDAHLSETGNPQLVYLDAELLATIDAKADVLKEKFLTSDQSFVR
FSPQFFFCSNMDLCLQHKTESFIKGSSNINLVWASLIVEECVRLGFTYFCIAPGSRSSAL
ALSATCHPLTTCISCYDERSLGFHALGYGRGSRKPAVVITSSGTAVSNLLPSVVEASEDF
IPIILLTADRPPELHDAGANQAINQVNHFGTFVRYFFNLPPPTDQIHARMVLTTLDSAAY
YAMQAPQGPVHINCGFREPLDYTNRDWNIDCLRGLDKWFLNSEPYTRYLIMKTVSAFGNY
SSSVMEILEIVEKADQGLLLVGALHTDDDMWAVALLARHLSWPIATDILSGLRLRKAVNL
VPGLDKSILFIDYIDQILLSDSAKNWISPDVVVQIGSRITSKRVGMFLETCFPSSYILID
RHPCRHDPSHVVTHRIQASVVEFAASLCHCNFPRKTSRWTDILMVVNSVVSQEIMFQIHS
KCSLTEPYVAQVIGESLYGDAIIFVGNSMVIRDLDMFGKGWTDYTTNGNSMIMHHFPDFV
GTTVAGNRGASGIDGLLSTAIGFAVGSNKHVFCVVGDMSFLHDTNGLALLNQRAPRKPMT
IIVVNNHGGAIFSFLPIAENTSPQILKKFFYTSHDISISNLCAAHRVKHFLVQTKAELHD
ALVKSKEEQIDCVVEVDNSIDSNANFHRIMNMFSAYSTTLYLDYLLGAPYFKSELNDMPV
DTIHGAEYMLYRIQLSAPRTSGLSDDRFSHEGIILKLHVDDNIAGFGEVAPIEIHEEDLL
DVEEQLRFIFHMMKDCVLDVIPLLKGSFSNWIWTSLGIPPSSIFPSVKCGLEMAILNLLA
SQRKCGWSKVLAGSDPLVQDQNSSASIEICALVDCNGTPMEVALAVAKLVAEGFTTVKLK
VGRRESPIEDAAVLHKIREVVGYQINIRVDANQKWTYEQAVEFGSRAKGLRLEYIEEPVS
SVNDLIKFCDKSGLPVALDETIDNLKGDVIPKLHQFVHPGIVALVIKPSVVGGFENAAHI
AKWAQMHDKMAVISSAYESSVGLASYIQLSHYVDQQNSIVSRIKNKGTCGVAAHGLGTYK
WLREDVSEQKLNIHATPLGDGIRTSVEDAHRYLHHLNISSNKIERTYSEEKLRSYSIQVD
VDDCSYIVKLQEAGDHTNEKVVLLLHGFLGTSDDWVPMMKALSPSARVIAVDLPGHGESQ
MLQHHVENSEQYLVTVQSVADLLLKLVGQITDGEVVVVGYSMGARIALHMALNQVHQIRG
AVIISGSPGLRDEESRRRRIAVDGSRAKFLMSCGLDCFLETWYSAKMWTSLREHPKFNSL
VRTRSKHKNIKALAKVLADSSVGRQKSLWEDLKHLKRPLLIVAGEKDTKFKDISQRMCSE
ITQHAECGSGGRDGNELCDVIIIPDSGHAVHVENPLPLVRAVRKFLQKLH
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttatccccttccgacttaaacccaaacgtccacttccaccaccactccgcttt
cgcctcttccgcctcctgcccaccgccggcatgctcgccgtctcgccccatccccgcctc
cctctactccccggcgtctgccccatcctctcttttcccttccagttcccttgccgccgc
taccgctccaccaccagccgcctccgctgtggtctccgccccctctgtcgcctccgcacg
gacgccatggccgggcggcgcgcgggcatcgtgatcgacgtggataaggtggcagagacc
ggcgacctagacctccctgtggatgtatcgttcacgaggaggcttccccctgcgctcact
gtcggtgacggtctcgacgcgctgcggcgggctgcagctgaggtcaaggccagcccgcct
gctggcgccaggagcggcgtgatcaggttcgaggtacttgttccacccagtacaaaggcg
cttaagtggtgctctcagtttaggggatcatcattgtttcctcagttttatttatcgagg
aagctaacctcttgtccatcatttcaacttgaaacctgtggcattgggtctgcaatttgc
ttgcacggttcctacctaggaaaacatggatttgatttagtattgagatatatttcttct
gattcacacttgataagggcttatggatttgtaggcatgaaatatgacgaggaattgtcg
tccatagaggagaaacttggctcatattacttcttcatccctcaggttgaattgagcgag
tttgatagttgttccatactatcatcaaccatggtttgggatgactctgtttctcataca
ttcaaggatgctgtttctttatttgaatcttgctttgatcagatacaaaatagctatgat
tcttcagacaacatttgtcacaaaggtctggtaccgagttacatttctggagatgcacat
ttgtcagagactgggaatcctcagctggtgtatttggatgcagaactgctcgccacaata
gatgccaaagctgatgtgctaaaggagaagtttctgacttctgaccagtcttttgttaga
ttttcaccacagttcttcttttgttcaaacatggacttatgcttgcaacacaagacagaa
tctttcatcaagggctcctctaacataaatttggtatgggcatcccttatagttgaagaa
tgtgttaggcttggtttcacgtacttctgtatagctccaggttcaagatcatccgcactt
gcactttctgctacatgccatcctttgacaacatgcatatcatgttacgatgagcggtca
cttggatttcatgctcttggctatgggagaggttctcgaaaaccagcagtagtaatcaca
tcatcaggaaccgctgtatcaaatcttcttccttcagtggtcgaggcaagtgaagatttc
ataccaattatattactcacagctgatcgtcctcctgagttgcatgatgctggagctaac
caagccatcaatcaggtcaatcattttggtacctttgtaagatatttttttaatctccct
ccacctactgaccaaattcatgcaagaatggttctcactacacttgattcagcagcctac
tatgcaatgcaagctccacaaggcccagtgcatataaactgtggttttagagaaccacta
gattacactaatcgagattggaatattgactgtttgagaggtttggataagtggttttta
aatagtgaaccatataccagatacctaataatgaaaacagtttctgcattcgggaattat
tctagttcagtaatggagattctggagattgtagagaaggcggatcaagggcttctatta
gttggtgctcttcatacagatgatgacatgtgggccgtggctttactagctaggcacctt
tcctggccaattgctactgatattctgtctggactgcgattgcggaaagcagtaaatttg
gtcccagggcttgataagagcattttatttatagactacatcgatcaaattctattgtct
gattctgctaaaaactggataagcccagatgttgttgttcagattggcagccgtattact
agcaaacgagtgggaatgtttctcgagacttgcttcccatcttcctacattttgattgac
aggcatccatgccgtcatgatccttcacatgttgtcacccacagaatacaagctagtgta
gtggaatttgctgctagtttgtgtcattgtaattttccaaggaagacaagcagatggaca
gatattttgatggttgttaattcagtggtttctcaggagataatgtttcagatacattcg
aaatgctcacttacagaaccatatgttgctcaagtaattggggagtcactttatggtgat
gctatcatatttgttgggaacagcatggtcatccgagacttagacatgtttggcaagggt
tggactgattacactacaaatggaaatagcatgataatgcatcattttccagactttgtt
ggcacaacagtggctgggaacagaggagcaagtggcattgatggtttgctcagcacagca
attggatttgcggttggatcaaacaagcatgtattctgtgtggttggcgacatgtccttt
cttcatgacacaaatggattggcacttctcaaccaaagggcaccgaggaaacctatgacg
ataatcgttgttaacaatcatggtggtgcaatcttcagctttctaccaattgcggaaaat
acttcaccacaaattttgaagaaattcttctacacatcgcatgacatatcaatttccaac
ctctgtgctgcacacagggtaaagcattttctagttcaaacaaaagcagagcttcatgat
gccttggtgaaatccaaagaggaacagattgattgtgtggtagaagtagacaatagcatt
gatagcaatgccaactttcatagaattatgaatatgttctctgcctattctacgactctg
tatctggattatcttctgggagctccatattttaagagcgagttaaatgacatgcctgtt
gatacaattcacggagcggaatacatgctgtacagaatccagctttctgcaccacgtact
tcagggctttctgatgacagattctctcatgaaggaattattctgaagcttcatgtggat
gataacattgcaggatttggagaggttgcaccaattgaaattcatgaggaggatctgttg
gatgtcgaagagcaacttaggtttattttccacatgatgaaagattgtgtgctagatgtt
attcctttgctgaaagggtctttctccaattggatatggacaagccttgggattcctcct
tcttcaatattcccaagcgttaaatgcggattggagatggccattctcaatttacttgca
tcacaacggaaatgtggatggtccaaagttcttgctggttccgaccccttagtacaagat
cagaacagttctgcaagcatagagatatgtgcattagtagactgcaatggtactccaatg
gaagtagcacttgctgtagccaaactggtcgctgaaggttttaccacagttaaactgaag
gttgggcgtcgtgaaagccccattgaggatgcagctgtccttcataaaataagagaagtt
gtagggtaccaaatcaatatccgtgttgatgcaaaccagaaatggacatatgaacaggca
gttgaatttggatcaagagcaaaaggccttcgtttggaatacattgaggaaccagtgagc
tctgtaaatgatctcatcaagttctgtgacaagagtggcttgcctgttgcactagatgag
actattgacaaccttaagggagatgtaatccctaagcttcatcaatttgtgcatccagga
atagttgctcttgttattaaacccagtgttgttggtggttttgagaatgcagctcatata
gcaaaatgggctcagatgcatgataagatggctgtcatcagtagtgcatatgagagttct
gtaggtttggcatcctatatacagttatcacattatgttgaccaacaaaactccatagtc
tccagaataaagaacaaaggtacatgtggggtggccgctcatggacttggaacatataaa
tggttaagggaagatgtatcagagcaaaagttaaatatccatgcaaccccacttggtgac
gggattcgaacttcagtagaagatgcccatcgttatcttcaccatttaaatataagcagc
aataagatagaaaggacatatagtgaagaaaaactgaggtcatattctatccaagttgac
gtggacgattgttcttatatagtcaaacttcaagaggccggtgatcatacaaatgaaaag
gttgttcttttacttcatggatttcttggtacgagtgacgactgggttcccatgatgaaa
gctctctcccccagtgcacgggtcattgctgttgatcttcctggtcatggcgagtcacaa
atgctgcagcatcatgttgaaaattcagaacaatatctggttacagttcaatcagttgca
gatttgttgctaaagttggtaggtcaaataactgatggtgaggtggttgttgttggctat
tcaatgggtgcaaggattgcactccatatggcactaaatcaagttcaccagattcgtgga
gctgtgatcatatcaggaagtcctggattgagagatgaagaaagtagaagacgtcgtatt
gctgttgatggatcaagagctaagttcctgatgtcctgtggactcgattgctttctggag
acatggtactcagcaaaaatgtggaccagtctacgagagcatccaaagttcaattcttta
gtgaggacacgcagtaaacacaagaacatcaaagctctagctaaggttcttgcagactca
agtgtggggagacaaaagtccctgtgggaagacttgaaacacttgaagaggcctctactc
atcgttgcaggtgaaaaggacacgaaatttaaagacatctcacagagaatgtgcagcgag
ataacacagcacgctgagtgtggatctggtggtcgggatggaaacgagctctgtgacgtg
atcatcatcccagatagcggccacgctgtgcatgttgagaaccctcttcctttggtaagg
gccgtgaggaagttcttacagaagctgcactga
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integrated database retrieval system
