KEGG   Setaria viridis (green foxtail): 117859634
Entry
117859634         CDS       T07951                                 
Name
(RefSeq) DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03030  DNA replication
svs03410  Base excision repair
svs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117859634
   03410 Base excision repair
    117859634
   03420 Nucleotide excision repair
    117859634
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svs03032]
    117859634
   03400 DNA repair and recombination proteins [BR:svs03400]
    117859634
Enzymes [BR:svs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     117859634
DNA replication proteins [BR:svs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    117859634
DNA repair and recombination proteins [BR:svs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      117859634
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT DNA_pol_D_N
Other DBs
NCBI-GeneID: 117859634
NCBI-ProteinID: XP_034598688
LinkDB
Position
6:30354363..30359507
AA seq 533 aa
MAPPSAATRRKLQRKFRLRGFTLKVDALEEAAAFLERFPDAEDDALDLLLDELDKEPLQS
SILDRDAVRRVVALLVEAEEAVDAASLAVTSARSALRVVDAFLVPRFHYDSIKKVFYEHT
GRLPIHGEAGAKASLYRDRYQVLLQRLSRDKYFSKPAFDTVVTEDSSCEITSIQSLIGCT
GRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQV
NTCGFPPLEDREASLSLLMGLDFFGGGVIPTEETLRLLSLEKKAINDMFVILSDVWIDNP
ETMEKLAVVLDGYDSVEVVPSLFVLMGNFCSRPCNLAFSSFEELRLQFGKLGEMIAARSR
LKEHSRFLFVPGPDDAGPSKALPRCALPKYLIEELLKHIPNAIFVSNPCRVKFYTQEIVF
FRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLY
PTPHAIVLGDKSEQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALEG
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcgccgccgtcggcggccacgcgcaggaagctgcagcgcaagttccgcctgcggggc
ttcaccctcaaggtcgacgccctcgaggaggcggccgccttcctcgagcgcttccccgac
gcggaggacgacgcgctcgacctcctcctcgacgagctcgacaaggagccgctgcagtcg
tcgatactggatcgggacgcggtccggcgcgtggtggcgctgctcgtcgaggcggaggag
gctgtcgacgcggcgtcgctggcggtcaccagcgcccgctccgcgctgcgggtggtggac
gcgttcctcgtgccgcggttccactacgactcaatcaagaaagtgttctacgagcacacc
ggtagattacctatccatggagaagctggagctaaagcttccctttatagggacaggtac
caagtgctacttcagaggctctctcgtgataaatatttctctaagccagcttttgacacg
gttgtgactgaagatagcagctgcgagattacttctatacagtctctaatcgggtgcact
ggacggagatggattatgggggtcatttcacagttggaggagcgccagttctacttggag
gatcttactggagcagttccaattgacttatcaaatgccaaaatcacgtcaggttttttt
gttgaaaatactgtaatcgtcgctgaaggggagctgctttcaaatggcattttccaggtt
aatacatgtggttttcctcccctggaggacagggaagcttcactttcattgctcatgggt
cttgatttctttgggggaggtgtaataccaactgaagaaacgctaagattattgtcactg
gaaaagaaggccatcaatgatatgtttgtcatactttcggatgtttggattgacaatcct
gagactatggagaagttagctgttgtccttgatggttatgatagcgtagaagtggtgcct
tccctcttcgttttgatgggcaatttctgctctcgtccctgcaacctagcattcagttca
tttgaagaactcagattgcagtttggaaagcttggcgagatgattgcagctcgatctaga
ttaaaggagcatagtcgtttcttattcgttccaggccctgatgatgcaggcccttctaaa
gcactcccaaggtgtgcgcttccaaaatatcttattgaagaacttctaaagcacatccca
aatgcaatcttcgtaagcaacccctgcagggtgaagttttatacacaagaaattgtgttt
ttccggcaagatctcctttacaggatgcggcggtcatgtctcattccaccaacaaccgaa
gaaacaagtgacccttttgagcatctggtagcaactatcacccatcagagtcatctttgt
ccattgccccttactgttcaacctatcatatggaattatgatcattgccttcggctgtat
ccaactcctcacgcaatagtattgggtgacaagagcgagcagaaagccttcaaatacact
ggaattacttgctttaatccaggttcgtttgcgaatgacagcacctttgcagcataccga
ccttgcactaaggaggttgagctttctgcactagaaggctaa

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