Setaria viridis (green foxtail): 117859715
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Entry
117859715 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
117859715
Enzymes [BR:
svs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
117859715
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
fn3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
117859715
NCBI-ProteinID:
XP_034598784
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Position
6:complement(35988999..35993738)
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AA seq
658 aa
AA seq
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MGKLSCRSLCCMGPPSPAGAGAVDATDGVRVKVSNRYVEIKNGIFELTLSNPDGIVTGVR
YNGVDNLMEILNKEDNRGYWDLVWNPPGQKTGIFDVIKGTEFRIIYHDENQAEVSFTRNW
DPSLEGKAVPLNIDKRFIVLRGSSGFYTYGIYEHKEGWPDFGLGETRVAFKLRKDKFHYM
ALADNRQRIMPMPDDRLPPRGQPLAYPEAVLLVDPINPDLRGEVDDKYQYSCEDQYNNVH
GWMSFDPPIGFWQITPSDEFRTGGPLKQNLTSHVGPTTLAMFLSAHYAGDDLSPVFTNGE
YWKKVHGPVFMYLNSSWDGSDPTMLWEDAKVQMMIEKESWPYSFALSEDFQKTEQRGCIS
GRLLVRDRYIDDEDLYASGAYVGLALPGEVGSWQRECKGYQFWCRADVDGSFYIRSIVTG
NYNLYAWVPGFIGDYRLDATLTIASGDDIYLGDLVYEPPRDGPTMWEIGVPDRSAAEFYV
PDPNPNYINRLYINHPDRFRQYGLWERYAELYPDSDLVYTIGQSDYSTDWFYAQVNRKVD
DNTYQPTTWQIKFTLDSVSPGSTYKFRVALASSARAELQVFFNDQNRGVPHFATGLIGRD
NAIARHGIHGLYWLFNINVDSAWLVQGMNTIYLKQPRNQSPFQGLMYDYLRLEGPCGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcttagctgcaggagcctctgctgcatgggccctccgtcgccggccggcgcc
ggcgccgtcgacgccaccgacggcgtcagggtcaaggtcagcaaccgatatgttgagata
aaaaatggcatctttgagctgacgctgtccaacccggacgggatcgtgaccggcgtgcgc
tacaatggtgtggataatctcatggagatccttaacaaggaagacaacagagggtactgg
gaccttgtttggaacccaccaggacagaaaaccggcatctttgatgtgatcaaaggcact
gagttccgcatcatataccacgatgaaaaccaggctgaggtctccttcaccagaaattgg
gatccttcccttgaaggcaaagctgtccccttgaacatcgataagaggttcatcgttctc
cggggttcttcaggattctacacctatggaatctatgagcataaggaaggatggcctgac
tttggcttgggagagacgagggtggctttcaagctccggaaagacaagtttcattacatg
gcattggctgacaacaggcagagaattatgccaatgcccgatgaccgactgcctccccga
ggccagccattagcataccctgaggccgtgctccttgtggacccaatcaatcctgatctc
agaggggaggttgacgacaagtaccagtactcttgcgaggaccagtacaacaatgtccat
ggatggatgtcattcgatcctcccatcggcttctggcagatcactccaagtgatgagttc
aggacaggaggacccctgaagcagaatttgacctctcatgttggccccactacactggct
atgtttcttagcgcacattatgcgggggatgacctttcacccgtgtttaccaatggagaa
tactggaaaaaggtccatggaccggtattcatgtaccttaattccagttgggacggaagt
gacccaactatgctctgggaggacgcaaaagttcagatgatgattgagaaagaaagctgg
ccatatagtttcgcactttcagaggattttcagaagactgagcaaagaggttgcatctct
ggtagattactagttcgagacaggtatatagatgatgaggacctttatgcctccggagcc
tatgtaggcttggccctaccaggagaagttggatcctggcaaagagagtgcaagggatac
caattctggtgtagagcagacgtagatgggagcttctacataaggagcattgtaactggg
aactacaacctgtatgcatgggttcccggtttcataggggactacagattagatgctaca
ctgaccatagcttcaggggatgatatttatctgggtgaccttgtgtatgaaccaccaaga
gacggtccgacgatgtgggagattggagtacctgatcgatccgccgctgagttctatgtc
ccagaccctaaccccaactatatcaatagactgtacatcaaccaccctgacaggtttagg
caatacggactttgggaacgatatgcagaactatacccagacagtgatctggtgtacaca
atcggccagagcgactatagcaccgattggttctatgctcaagttaacagaaaagttgat
gacaacacttaccaaccaactacatggcaaatcaagttcactcttgacagtgtgagtcca
ggcagcacctataagttccgagtggcgcttgcgtcttcggcacgcgctgagttgcaggtt
ttctttaacgatcagaacaggggtgttcctcacttcgccaccgggctgatcggcagggac
aacgccatagcaagacatgggatccatgggctatactggctgttcaacatcaatgtggat
agtgcctggcttgtccaagggatgaacacaatctacctgaagcagcccaggaaccagagc
ccatttcaggggctgatgtatgactacttgcgtttagagggaccgtgtggctgctaa
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