Setaria viridis (green foxtail): 117859736
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Entry
117859736 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP isoform X2
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
svs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117859736
04120 Ubiquitin mediated proteolysis
117859736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svs03110
]
117859736
04131 Membrane trafficking [BR:
svs04131
]
117859736
04121 Ubiquitin system [BR:
svs04121
]
117859736
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117859736
Chaperones and folding catalysts [BR:
svs03110
]
Other chaperones and cochaperones
Others
117859736
Membrane trafficking [BR:
svs04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117859736
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
U-box type E3
117859736
Multi subunit type E3
STUB1-CHIC2 complex
117859736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
zf-NOSIP
TPR_8
TPR_11
Syntaxin_2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117859736
NCBI-ProteinID:
XP_034598810
LinkDB
All DBs
Position
6:complement(8357710..8362418)
Genome browser
AA seq
229 aa
AA seq
DB search
MLQYIGPTGHFAIRSGSLEWAKVEEDCRTAIQLDSQSVKGHYMLGLALVNSQRLSEGIKA
LEKSLELGRGAHPASYMVEEIWQELSKAKYIEWEGLSRERAFQLQKLKVECKQALRNYNS
LGNPAADEPEEQLNELEEVFKKAAKADTPAEVPDHLCCKITLDTFRDPVITPSGVTYERA
VLLDHLQTVGKFDPLTREALEPHQLVPNLAIKEAVHAFLSEHGWAYKIR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagtatattggaccaaccgggcactttgctataagaagcggaagtcttgagtgg
gccaaggttgaggaagactgtagaacggctatccagcttgacagccaatctgttaaggga
cattacatgctgggcctagcacttgtcaacagccaaagattgtctgaaggaataaaagca
ctggagaagtccttggagctaggaaggggtgcacatcctgcaagctacatggttgaagag
atttggcaagagctttctaaagcaaaatacatcgaatgggaaggcttatcaagagagcga
gcctttcaattgcagaagctgaaggtagaatgcaaacaagctcttaggaattacaatagc
cttggtaatccagctgcagatgaacctgaagaacagctaaatgagctagaggaagttttc
aagaaagctgcaaaggctgatactccagcagaagttcctgatcatctctgctgcaaaatt
acacttgataccttcagagacccagtgatcaccccaagtggagttacttatgagagggct
gtacttcttgaccatcttcaaacggtggggaagtttgaccctttgacccgtgaggcgctt
gaaccacaccagctagttccgaatcttgccatcaaggaagctgtacatgcatttttgagc
gagcatggttgggcttacaagataagatga
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