Setaria viridis (green foxtail): 117859753
Help
Entry
117859753 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K13210
far upstream element-binding protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117859753
03041 Spliceosome [BR:
svs03041
]
117859753
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117859753
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117859753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_SLS1_1
Motif
Other DBs
NCBI-GeneID:
117859753
NCBI-ProteinID:
XP_034598829
LinkDB
All DBs
Position
6:652670..657986
Genome browser
AA seq
699 aa
AA seq
DB search
MADSDAAPPTPPPEVVVHAEDHPPAADSAAAAAQEDAAPGEVDHKRKLEEVGADAEANGD
GEDAKRPRVDGETDAPPGTEQQNDGSSVNVEEAAAAEDGGVAATEGVADGDNGTVAASEE
KPLEPTPEAAAEAPQQEVDAADASQETSRKIEVPNSKVGVLIGKAGETIRNLQMSSGAKI
QITKDVDADSNALTRSVELVGTLGSVDKAEQLIKSVIAEAEAGGSPALIARGFGSGQSGS
EQFEMTVPDNKVGLIIGKGGETIKGLQTRSGARIQLIPQHPPEGVTLTERTVRVTGNKKQ
IEAAKDLIKQAMNQNFSKHTNQSGGYGSQGYRPQGHGAASQWGPRSQSQPGYGYPPRGMP
PPQNYNPPYGGYPPQGPPRGGMGWDQRQGPPPHPSYQGGGSDYYKQGSQPYDSQPPSYPP
GPGNFNSYGQSQAPGYGQPPYPQHAPQQNYGHGYGDPRYNAPPPNQYYGQPPMGPQQGYP
QQPDPYARPPYNGPGQWAPPRGAPAADGSYQAPPPASYGPPSQQPPAYGQTYGAATGPDG
YAQQGYPQQGGQAPAPYGQSAPAAQGYPQQGAQQGGYVQYPQTQPAYGDQAAQANANYGY
QGAPADPNYGNAYPQSGYGPAPAVGQAGYASAPAAGQPAAYGQAGYTQPPANPPSYDQSA
AAPAQTGYTAPAANPQPAPAKGVSPQPAAAGYGGGQWTG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccgacgccgcgccgccaacgccgccgccggaggtggtagtccacgccgag
gaccatcctccagccgccgactccgccgccgccgccgcgcaggaggacgctgcgccgggc
gaagtcgaccataagaggaagctcgaggaggtcggcgccgacgcggaggcgaacggcgac
ggcgaggacgccaagcgaccccgcgtcgacggcgagaccgacgcccccccagggactgag
cagcagaacgatgggtcctccgtgaacgtcgaggaggccgctgctgcggaggacggaggc
gttgctgctaccgagggggtggcagatggtgataatggcacggtcgcggcttctgaggag
aagccactcgagcctacaccggaagcagcagctgaagctccacagcaggaagttgatgca
gcggatgcatcgcaggagacatctcgtaaaatcgaagtgcccaatagcaaggttggtgtc
ctgattggaaaagctggtgaaactatcaggaacttgcaaatgagctcgggcgcaaagatc
caaatcaccaaggacgtcgatgctgattcgaatgctctgacccggtcggttgaactagtt
ggaacccttggaagtgttgataaagctgagcagcttattaagagtgttatagctgaggct
gaggctggcggttcccctgctttaatagctagaggttttggaagtggtcagtcgggatca
gagcaatttgagatgacagttcctgataacaaggttggcctcattatcggaaaaggcggt
gagacaattaaaggcctgcaaacaagatctggtgctcgtattcagttgataccccaacat
cctccagagggtgttacattgactgaaagaactgtacgtgttactgggaataagaagcag
attgaagctgcaaaggatttgatcaagcaagcaatgaatcagaatttctcaaagcataca
aatcaatctggtggatatggttcgcaaggttaccgccctcagggtcatggtgcagcttct
cagtgggggccacgctctcaaagccagcctggctatggatacccaccaagaggtatgcct
ccacctcagaactataacccaccctacggtggttacccaccgcagggacccccaagaggc
ggcatgggctgggaccaaaggcagggcccgccaccccatccttcatatcagggtggtggt
tctgactactacaagcagggatctcaaccatacgatagccagccaccaagctaccctcct
ggaccagggaactttaacagttatgggcaatctcaggctcctggctatggacaacctccg
tatccgcaacatgcacctcaacagaactatggccatgggtatggtgatcctagatacaat
gctccaccgccgaaccagtattatgggcagccaccaatgggtcctcagcaaggctatcct
cagcagccagatccttatgctaggcctccatacaatggacctggacaatgggcgcccccc
agaggtgctccggctgcagatggctcctaccaggcaccaccacctgcatcttatggtcca
ccctcccagcaacctcctgcttatggccaaacatatggcgcagcaacaggacctgatggg
tatgctcaacagggctacccacagcagggtgggcaagcaccggccccgtacggccagagt
gcaccagcagcacaaggctatcctcagcaaggcgcacagcaaggtggctatgtgcagtac
ccgcaaacccaaccagcatatggtgatcaagcagctcaagccaacgcgaactatggttac
cagggagctccagcagaccccaactatggaaatgcctacccacagtcaggatatggacct
gctcctgcagtcggtcaggctggttatgcttctgcaccagcagctggccagcctgcagca
tatggccaggcaggatacacccagccacctgcaaaccctccaagttatgatcagtctgca
gcagcaccagctcagaccggatatactgcaccggccgcaaacccacagcctgctccagca
aagggggtgtcgccacagcctgctgctgctggatatggtggtgggcagtggaccggatga
DBGET
integrated database retrieval system
