Setaria viridis (green foxtail): 117859765
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Entry
117859765 CDS
T07951
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic isoform X2
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00500
Starch and sucrose metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117859765
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svs01003
]
117859765
Enzymes [BR:
svs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
117859765
Glycosyltransferases [BR:
svs01003
]
Polysaccharide
Storage polysaccharide
117859765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Ig_PIFI
Motif
Other DBs
NCBI-GeneID:
117859765
NCBI-ProteinID:
XP_034598838
LinkDB
All DBs
Position
6:complement(3002553..3012087)
Genome browser
AA seq
1414 aa
AA seq
DB search
MEMALLPRSPLCSRGRSAPVVRRTTLDGGSAQPFLRTSGFARSRIIWCTVASSDCPNRKS
RKMVYPKVKLTAFSGYVPRLPAESSTKKSERHDSDEGDGIYNRLLSTDTEGLETAEVDLP
ENASSSSAYGEVDVAEEAALDMVEVELSRNALTNMSLGEVEAVDEAAVEEDKFAVDLSGI
ELSIAAVCELDPKDEAKAKEDIFMAVESSDETSDVENEQWQYPALPSTSIEDKANNETHG
SLKPQSMPLVRVQEQGKSIVGVPEQIQSIVVYRKPDQSIVASHRKDESIAVVPEQIQSVV
GYSKPDQSIVGVPDQIKSIVGYSKAEQSVVHIPKEEQSVVGFPKQDLSIVGTTKESQTKK
LDFPGSHQTFSTEGVEAKEGDYTPQKPDGDMLHAKSDVDDLLQKHKEDFSEEESETITSI
EEQINTSMEEEQCIVTEEGIPEVEDEMETGEDRFLHQLSEEESSWAEDEVETTEDEEQYE
VEESSFVSAEQDTQESPQDYLDPQALQRMLQELAEKNYSLGNKLFVFPEVLKADSTIDLY
FNRDLSSLANEPDVLIKGAFNGWRWKFFTEKLHKSELGGDWWSCKLYIPKEAYRLDFVFF
NGRTMYENNGRKDFVIPIESTMDEHSFADFLVEEKQRELEREAQRKSQTEEQQRLEEERA
ANEADRAQAKAEVQTQKIKLQNVLDSAKASVDNLWYIEPITTMQGATVRLYYNRHSRPLV
HSTEIWMHGGYNNWIDGLSFSERLVHIDDKDGDWWYADVALPQRAYVLDCVFADGPPGNA
RNYDNNGRQDFHAILPNSIMTEEGYWVEEEQRIYTRIQRERREREEAIKMKAERRAKMKA
EMREKTMRMFLVSQKHIVYTEPLEIRAGTTVDVLYNPSNTVLKGKPEVWFRCSFNRWMHP
GGVLPPQKMVKAEHGSHLKATVNVPHDAYIMDFVFSESEEGGIFDNRNGLDYHIPVFGSI
AKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKHDCLNLSNVKNL
HIHQNFSWDGSEIKVWRGLVEDLCVYFLEPQNGMFGVGCVYGRNDDRRFGFFCHSALEFL
HQRGSSPNIIHCHDWSSAPTAWLYKENYVQSSLANARVVFTIHNLEFGAHHIGKAMKYCD
KATTVSNTYSREVSGHGAIAPHLGKFYGILNGIDQDIWDPYSDSFIPVQYTSENVVEGKR
AAKRALQQKFGLQQNDVPIVGIISRLTAQKGIHLIKHAIQRTLERNGQVVLLGSAPDPRI
QGDFTNLAHDLQNQNHGRARLCLTYDEPLSHLIYAGSDFILVPSIFEPCGLTQLVAMRYG
AIPIVRKTGGLYDTVFDVDNDKDRARARGLEPNGFSFDGADSNGVDYALNRAITSWFDAR
DWFHSLCKRVMEQDWSWNRPALDYIELYRSASKL
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctctcctaccccggagccctctctgctctcgaggaaggtcagcgccagtg
gtccggcgaaccaccttggacggtggctccgctcagcctttcttgaggactagcggattt
gccagaagcaggattatttggtgcacagtagcaagttcagattgtcctaataggaaatca
aggaagatggtgtatcctaaggtaaaactcactgcttttagcgggtatgttccaagactc
cctgctgaatcgagcaccaagaagagtgaacgccatgatagtgatgaaggtgatggtata
tacaataggctgttaagtactgatacagaaggtttagaaactgctgaagtggatttgcca
gaaaatgcttcgagcagttcagcatatggggaagtggatgtggcagaagaagctgcactg
gacatggttgaggtcgaattgtcaagaaatgcattgactaatatgtcattaggggaagtg
gaagcagtagatgaagctgcggtcgaagaagataaatttgcggtagatctctcaggaatt
gaattgagcattgctgcagtttgcgaacttgatccaaaggatgaagctaaagctaaagaa
gacatatttatggcagtggagtcttcagatgaaacctctgatgtagagaatgagcaatgg
caatatccagcactgccatcaacatccatagaggacaaggccaataatgaaacacatgga
agtttgaagcctcagtccatgccacttgtcagggtccaggaacaaggcaaatcaattgtt
ggtgtgcctgagcaaatccaatccattgttgtttacagaaaaccagatcaatctattgtt
gcttctcacagaaaagatgaatcgattgctgttgtgcccgagcaaatacaatccgttgtt
ggttatagtaaaccagatcaatctatcgttggcgtgcctgatcaaatcaaatccattgtt
ggttacagtaaagcagaacaatcagttgttcatatccctaaagaagaacaatccgtagtt
ggctttcctaaacaggacctatcaattgttggcaccaccaaagagtctcaaacaaagaaa
cttgattttcctgggagtcaccagacatttagtacggagggagtagaagctaaggaggga
gattacacacctcaaaaacctgatggggatatgcttcatgcaaagtctgatgttgatgac
ttgttacagaaacacaaggaggatttctctgaagaagaatcggagacgataactagcatt
gaagagcagataaatacaagcatggaggaagaacaatgcattgttactgaggaaggcatt
ccagaggttgaggatgagatggaaacgggcgaggacaggtttctgcatcaactttctgaa
gaagagagttcatgggctgaagatgaagtggagacaactgaggatgaagaacagtatgaa
gttgaggagtcgtcttttgtgtctgccgaacaagatacccaagaatcaccacaggattac
ctggatccacaagcactacagaggatgcttcaagaacttgctgaaaaaaattattcgctg
ggaaacaaactttttgtttttccagaggtactgaaagctgattcaactattgatctctat
ttcaatcgtgatctatcatctttagccaatgagcctgacgtactcatcaaaggagcattc
aatgggtggaggtggaagtttttcactgaaaaattgcacaagagcgaactgggaggggac
tggtggtcctgcaaactgtacattcccaaggaggcatacagattagattttgtgttcttt
aatggtcgtacaatgtatgaaaataatggcagaaaagattttgtgataccaatagaaagc
accatggatgaacattcgtttgccgatttcttggttgaagaaaagcaaagagaacttgag
agagaagctcaaaggaagagccagactgaagagcagcagcgattagaggaagaaagggct
gcaaatgaagctgacagggcacaagcgaaggctgaggtacagacacagaagattaaattg
cagaatgtattggattcagccaaagcttctgttgataatttgtggtacatagaacctatc
acaactatgcaaggggctactgtcagattgtattacaacagacactcgagaccacttgtt
cacagtactgaaatttggatgcatgggggctacaacaattggattgatggactctctttt
tctgaaagacttgttcatattgatgacaaagatggtgattggtggtatgcagatgttgcc
ttacctcaaagagcatacgtgttggactgcgtttttgctgatgggccaccagggaatgca
aggaattatgataacaatggcagacaagattttcatgctatccttcccaatagcatcatg
actgaggaaggatattgggtggaagaagaacagaggatttatacaaggattcaacgcgag
aggagagaaagggaggaggctattaaaatgaaggctgagagaagggcaaaaatgaaagct
gagatgagggaaaagactatgagaatgtttctggtttctcaaaaacacattgtttatacc
gaaccacttgaaatacgtgctggaacaactgttgatgtgctttacaatccttctaataca
gtgttaaagggaaaaccagaggtgtggtttcgatgttcttttaaccgttggatgcatcca
ggtggtgtgttgccaccccaaaagatggtaaaagcggaacatggttcacacttaaaagca
acagttaacgttccgcacgacgcctatataatggactttgttttctcggagtcagaagaa
ggtggaatttttgacaacaggaatgggttggactatcatattcctgtttttggttccatt
gcaaaggaacctcctatgcatattgtccacattgctgttgagatggctcccattgcaaag
gttggaggtcttggtgatgttgttacgagtctttcacgtgctgttcaagatttaggacac
aatgttgaggttattcttccaaagcatgattgcttgaatctaagcaatgtgaagaattta
catatacatcaaaatttttcttgggatggttctgaaataaaagtatggcgtggacttgtt
gaagacctctgtgtttacttcttggaacctcaaaatgggatgtttggagtcggatgtgta
tatggaaggaatgatgaccgtcgatttggcttcttctgtcattctgctcttgaatttctc
caccagaggggatcttctccaaatataatacattgccatgattggtcaagtgctcctact
gcctggctatacaaggaaaactatgtgcaatccagtttggcaaatgcacgggttgtattt
acgatccacaatcttgaatttggagcacatcatataggcaaagcaatgaaatattgtgat
aaagccaccactgtctctaatacatattcaagggaagtgtcaggtcatggcgccatcgct
cctcatcttggaaaattctatggcatcctcaatggaattgatcaagatatctgggatcca
tacagtgacagctttattccggtccaatacacttccgagaatgttgttgaaggcaagcgc
gctgcaaagagggccttgcagcagaagtttgggttacagcaaaacgatgtgcccattgtt
ggaatcatcagtcgcctgacagcccagaagggaatccacctcatcaagcatgcgattcaa
cgaacacttgaacggaatggacaggtggttttgcttggttcagccccagaccctcgaatc
caaggtgattttaccaacttggcacatgatctccagaaccaaaaccatggtcgagcgagg
ctgtgtttaacctacgacgagcctctttcacatctgatatacgctggctctgacttcatt
ctggttccatccatatttgagccttgtggcttaactcagctggtcgccatgcggtatgga
gccatccctattgtccggaaaactggagggctctacgacactgtctttgatgtggacaat
gacaaggaccgagcccgggctcgaggccttgagccaaacgggttcagcttcgacggagct
gacagcaatggtgtcgactatgccctgaacagggcgatcacttcttggttcgacgcccgg
gactggttccactccctctgcaagagggtcatggagcaggactggtcatggaaccggccc
gccctggactacattgagctctaccgttcggcatccaaactgtga
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