Setaria viridis (green foxtail): 117859882
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Entry
117859882 CDS
T07951
Name
(RefSeq) solanesyl-diphosphate synthase 1, mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00900
Terpenoid backbone biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117859882
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svs01006
]
117859882
Enzymes [BR:
svs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117859882
Prenyltransferases [BR:
svs01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117859882
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
117859882
NCBI-ProteinID:
XP_034598961
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All DBs
Position
6:complement(2862460..2868097)
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AA seq
412 aa
AA seq
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MPTCYKNTATRKVESILTCCSNIPQSNISLVVFTMHFNCPFKFNPHNMCYWDRFTWSSCY
FHCTSDHSSRKAGLTAKEQLDPFVLIKDEVSEVTDRLRSMVVAEVPELTSAAGYFFRAGA
EGKRTCPTVLLLMASAISMDIADGLENKPRARHMHLAEITEMIHIWSLIHDDVLDDADTR
RGMDSLNFKVGKKLAVLAGDFLLFRAFSAAVSLDNTEVVSLLATAVNNLVTGELMQMSIT
PAQRCSMDYYLQKTYYKTAALISNSCKAIAVLAEQTTEVQALAYQYGRHLGIAYQLIDDI
LDFTGTSASLGKASLSDIHQGIVTAPILFAMEEFPELHEIVEQGFDDPLNVKMALKYLSK
SQGIERTRSLAAEHAKLAAGAIDDLPDSEDQVVLNSRQALKDLTQKFMRRTK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcccacttgctacaagaacacagctaccagaaaagtggaatccatactcacatgctgc
tctaacatcccgcagtcaaacataagtttggttgtgtttacaatgcatttcaactgccca
ttcaaatttaatccacataatatgtgctattgggacagatttacttggagttcatgttat
tttcactgcacaagtgatcattcttccagaaaagcagggctaacagctaaggagcagcta
gacccctttgtgctgattaaagatgaagtctctgaagtgacagatcgattgcgctcaatg
gtggttgctgaggtgcctgaactgacatcagcagctggatacttcttcagagctggagct
gaagggaaaagaacttgtcctactgttctactattgatggcttcagctataagcatggac
atagctgatggcttagagaataagcctcgagcaaggcatatgcatcttgctgagataact
gaaatgattcatatatggagccttattcatgatgacgttttggacgatgctgatactagg
cgtggcatggactcattgaacttcaaagtggggaagaaacttgcagtattggctggcgat
ttcctacttttcagggcattttctgcagctgtgtctcttgacaatactgaggttgtatca
ttactagcaactgctgtaaataatcttgttactggtgagcttatgcagatgtcaataact
ccagcacagcgctgcagcatggactattatttgcagaagacatactacaagacagctgca
ttgatttcaaacagctgcaaagctattgctgtccttgctgagcaaacaacagaagtacaa
gctcttgcctatcagtatggcagacacttgggcatagcatatcagttgatcgatgacatc
ctcgatttcacaggcacatcagcttcactaggcaaagcctccttgtctgatatccatcaa
ggaattgtgacagctcccatactttttgcgatggaagaattccctgaactgcatgagatt
gttgaacagggatttgatgaccctttaaatgttaagatggccctcaaatacctttcaaaa
agtcagggaatcgagaggacgaggtctcttgctgctgaacatgcaaaactggcagcgggc
gctatcgatgatcttcctgatagtgaggatcaagttgtgcttaactcgaggcaagcgctc
aaagatcttactcaaaagttcatgagaagaacaaagtga
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