Setaria viridis (green foxtail): 117859960
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Entry
117859960 CDS
T07951
Name
(RefSeq) protein SHORT INTERNODES 1
KO
K27807
short internodes/stylish family transcription factor
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117859960
Transcription factors [BR:
svs03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117859960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
117859960
NCBI-ProteinID:
XP_034599056
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All DBs
Position
6:complement(35368527..35370456)
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AA seq
308 aa
AA seq
DB search
MAGFPLGGGGGGGGHHHDGRGDHHHPHVNPSSSGSDSATAAAAAAAAYLYTTAAAAPRGG
GFQLWPHHPAQEHHHFYAPNIIRFADDPAAGSSRGGRGSASGAGAGTISCQDCGNQAKKD
CAHMRCRTCCKSRGFDCPTHVKSTWVPAAKRRERQQQLTTSGGGAEPSKRPRDTQPSSTT
ATTTSSGEQQQQMAMVGERFPREVSSEAVFRCVRLGPVDEADAEVAYQTSVSIAGHVFKG
ILHDVGPDPSVAAGGGGYRHAAEGSSPSTAAAGEGSVAGPVSSSAVVMDPYPTPGPYGGA
PFFHGHPR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttccctctaggcggcggcggaggaggaggaggacaccaccacgacggccgc
ggcgaccaccaccacccccacgtcaacccttcctcctccggctccgattctgcgactgcc
gcggcagccgccgcggccgcctacctctacacgacggccgctgcggcgccacggggcggc
gggttccagctatggccgcaccacccggcgcaggagcaccaccacttctacgcgcccaac
atcatccgatttgccgatgaccccgccgccggctcctcgcgtggcgggaggggctccgcc
tccggcgccggcgcggggaccatcagctgccaggactgcggcaaccaggccaaaaaggac
tgcgcccacatgcgctgccgcacctgctgcaagagccggggcttcgactgccccacccac
gtcaagtccacctgggtgcccgccgccaagcgccgcgaacgccagcagcagctcaccaca
agcggcggcggcgccgagccgtccaagcgaccgcgcgacacccagccttcttccaccacc
gccaccaccacttcctccggagagcagcagcagcagatggcgatggtgggcgagaggttc
ccgagggaggtgagctcggaggcggtgttccgctgcgtgcggctgggcccggtcgacgag
gccgacgccgaggtggcgtaccagacaagcgtcagcatcgccggacacgtcttcaagggc
atcctgcacgacgtcggcccggacccgtcggtcgcggcgggcggcggcggataccgacac
gccgccgaggggtcctccccgagcacggccgcggcgggcgaaggcagcgtcgcggggccc
gtctcgtcatcggctgtggtcatggacccgtacccgacgcccggcccctacggcggcgcg
ccgttcttccacggccatccgaggtga
DBGET
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