KEGG   Setaria viridis (green foxtail): 117859991
Entry
117859991         CDS       T07951                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117859991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117859991
   03041 Spliceosome [BR:svs03041]
    117859991
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117859991
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117859991
Spliceosome [BR:svs03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117859991
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 BRAP2 HSP90
Other DBs
NCBI-GeneID: 117859991
NCBI-ProteinID: XP_034599090
LinkDB
Position
6:complement(18668587..18671731)
AA seq 350 aa
MAGKTKEFDGASPAKIFIGGLSKDTSMGTFKEHFGKYGDITDAVIMKDRYTQKPRGFGFI
TFADPAVVDRVIEDEHVINGKPVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALKEDEFKE
FFSKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKTVDELLAKKGNMIDLNGSQVEIKKAE
PKKPSNPPPRSLDSEPRGRPYAESYDGFGSSYNYGGSFGPYRSPGSFGARPGGYSSVYGP
GDYGSGYGAYGGALGAYRGESSLYSSRFGSTYGGSFGAYGGGSYAGGLAGAYGRDPEGYG
GSSYGPSYDSSGASAGSGAGYGTGGLYGARTGYGSTGGSGAAGRYHPYGR
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggccggcaagacgaaggagttcgatggcgccagccccgccaaaatctttatcggggga
ctctccaaggacaccagcatgggtacattcaaagagcattttgggaagtatggtgatata
actgatgccgtcataatgaaggaccgctacactcaaaagcctagaggctttggatttatt
acctttgcagatcctgctgttgttgacagagtgattgaagatgagcatgttatcaatgga
aagccggttgaaattaaaagaactattcctaagggtgctgcccccttgaaagatttcaag
acaaagaagatttttgttggtggattacccactgctctaaaagaagatgaattcaaggag
ttcttttcaaagtttggaaaggtggtggagcatgaaatcatccgtgaccatgcaaccaac
cggtcacgtggatttggttttatagtctttgatgcagaaaaaactgtagatgagttatta
gctaagaaaggcaatatgattgatctaaatggttctcaggtggagatcaagaaggcagaa
ccaaagaaaccctctaacccaccacctcgttcacttgatagcgaacctaggggccgtcca
tatgcggaaagttatgatggatttggcagctcttataactatggtggtagttttggcccc
tatagatcacctggaagttttggtgctaggcctggtggatacagtagtgtttatggtcct
ggtgactatggtagtggctatggtgcttatggtggagcattaggagcataccggggagaa
tcctcactctattctagtcgctttggtagcacttatggaggaagctttggtgcttatggt
ggtggcagttatgctggtggattagctggtgcatatgggcgtgatcctgagggttatggt
ggttctagctatgggcctagttatgattcttcaggtgctagtgctggttctggtgctggg
tatggcacaggtggactctacggtgctaggacaggctatggtagcaccggtggcagtggt
gctgctggtcgttaccatccatatggaagatag

DBGET integrated database retrieval system