Setaria viridis (green foxtail): 117860019
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Entry
117860019 CDS
T07951
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117860019
Spliceosome [BR:
svs03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117860019
Other components
Complex C specific factors
117860019
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117860019
NCBI-ProteinID:
XP_034599119
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Position
1:complement(8261066..8264145)
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AA seq
843 aa
AA seq
DB search
MAEEAEGMDRFDMEGDFEGGRFGRDGEFYYRSRRERAPQTRDDAIYGVFAEGDSDYDSED
DEGSRRRGRRKRRRDGGGEPDLTKPVQFVSTGKFMPTQEPQPEPDQRPGLGRAAAAAAKE
EEAEEEQDDEGDTEMLPTIFGRIREGARARREEKEREREKAARRRQAAGVDAGEPAAALG
SLEANSKVAKMMAMMGYKKGMGLGKNKQGITAPVETTLRPKNAGLGSVEGFKEPKPMMAK
ENLPAPAPPPTSGKKEKRWSKKASTKKAPVMTKNELLATRAEQEQEEQPTVVQKVIDMRG
PQARVLTDLKGLNEEQEMEANDVPMPELQYNVRLLVDEAKADVLRLDGQLRREQEKVASL
VREKEKVAKQEAAQKRQLQVMEIIAETLEQVRVDDTAGMLTLDGLLQTFHGLKVQFEEEF
KMCSIAWIACRYAHPLLIRIFQGWQPLQDPKFGLDVMKKWKDLLQGDQPFDFSDGSASMT
PYVQLVSEVILPAVRISGTNSWEAREPEPMLNFLELWDNKKLLPPVLLQSILEHVIMPKL
SAAVDSWDPRRESVPIHVWVHPWLPMLRERIETLCHSIRYKLSTVLHVWQAHDASAYAVL
SPWKDVFDSASWEDLIVRYIIPKLRLALQEFQINPANQKLDQFNWVMLWASAIPVHLMVH
MLEVDFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRMLLTAGLDMM
NQAAEGLEVVQPGARENVGYLRATEKRHFDAAQQAYNAVPGAAMADLSFKESIQAYAMEQ
GLLFMPRVGKFYNGMPVYEFGTISICIDSVKRLLYAQLQEGIERWSAVTLTQLMEMNRMG
RSR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcggaggggatggaccggttcgacatggagggggacttcgagggcggg
cgattcggccgggacggggagttctactaccggagccggcgggagcgggcgccgcagacc
cgcgacgacgccatctacggggtgttcgcggagggcgactccgactacgactcggaggac
gacgaggggtcccgccgccgcggccgccggaagcgacgcagggacggcggcggggagccc
gacctcaccaagcctgtccagttcgtctccaccggcaagttcatgcccacccaggagccg
cagcccgagcccgaccagcggccggggctcgggcgcgccgccgccgccgctgccaaggag
gaggaggcggaggaggagcaggacgatgagggggacaccgagatgctgccgacgattttc
ggcaggatcagggagggcgcccgtgcaaggcgggaggagaaggagcgggagcgcgagaag
gcggcgcgccggcgccaggcggccggggtggatgccggggagccggcggcggccctcggg
agcctggaggctaactccaaggtggccaagatgatggccatgatggggtacaagaaagga
atgggccttggcaagaacaagcaggggatcaccgcgccggtggagaccactttgcggccc
aagaatgccggcctggggagcgttgaggggttcaaggaacccaagcccatgatggctaag
gagaacttgccggccccggctcctccgccaacatcagggaagaaggagaagcgttggtcc
aagaaggctagcacaaagaaagctccggtcatgacgaagaatgagctcctggccacgcgt
gccgagcaggagcaggaggagcagcccacggttgtccagaaggtgattgacatgcgaggg
ccgcaggcgcgggtgctgacggacttgaaggggctcaatgaagaacaagagatggaggcg
aatgatgtgccgatgccggagctgcagtacaatgtgcgcctgcttgttgatgaggctaaa
gctgatgttctgaggttggatgggcagctgcgaagggagcaggagaaggtggctagcttg
gtgcgggagaaggaaaaggtggccaagcaggaggcagcacagaaacgccagctgcaggtg
atggagataattgcagagacactagagcaggtccgcgtggatgatacagctggcatgctc
actctggatggattgcttcagacattccatggcttgaaggtgcaatttgaggaggagttc
aagatgtgcagcattgcatggattgcttgcagatatgctcacccactgctaatccggatc
ttccagggatggcagccccttcaggatccgaagtttgggttagatgtcatgaaaaagtgg
aaggacttgctgcagggggaccaaccatttgacttctcagatggttctgcatcaatgaca
ccatatgtgcagcttgttagtgaagtcatcctgccagctgtgaggatatcaggaactaat
tcatgggaggctagggaaccggaaccaatgctcaactttcttgagttatgggataataag
aagttgctacctcctgttttgcttcaatcaatactagagcatgtcataatgccaaagctc
tcagctgctgtggattcatgggaccctcgcagggagagtgtgccgatccatgtctgggta
cacccatggttgccaatgctaagggaaaggatagagaccttgtgccattctattcgatac
aagttgagcactgtcctccatgtgtggcaagcacatgatgcttccgcgtacgctgtgttg
tctccgtggaaggatgtgtttgattcggccagctgggaagacctgattgtgcggtatatc
attcctaaactgagattggcactgcaagagtttcagatcaacccagcaaaccagaaactt
gatcagttcaactgggtgatgctgtgggcatctgcaatcccagtacacctcatggtccat
atgttggaagttgacttcttcagcaagtggcagcaggtcctataccattggttgtgctca
ccaaatcctgatttcaatgagataatgaactggtataagggctggaagggccttttccca
ccagagttacttgccaatgagcgcatacggatgcttctaactgctggtcttgacatgatg
aaccaagctgctgaaggacttgaggtggtgcagcctggggctagggaaaatgtgggctac
ttgagagcaactgagaagcgacattttgatgcagcacagcaggcttacaatgctgtgcca
ggggcagccatggcggatttgagcttcaaggagtctatccaggcatatgcaatggagcaa
ggtttgctgtttatgcctagggttggcaagttctacaatggcatgccggtgtatgagttt
ggcaccattagtatttgcatagactctgtgaagcgactactgtatgcacaacttcaagag
ggaattgagagatggagtgctgtaactcttacacaattgatggaaatgaaccgaatggga
agatcacgctaa
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