Setaria viridis (green foxtail): 117860024
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Entry
117860024 CDS
T07951
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117860024
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117860024
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117860024
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
117860024
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117860024
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117860024
Prokaryotic type
117860024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
117860024
NCBI-ProteinID:
XP_034599122
LinkDB
All DBs
Position
6:16279698..16294661
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AA seq
739 aa
AA seq
DB search
MLVCLRRGLSLVRQHTPRFLPSSPLRPARFLLHHLSAAAGMGEGSSAGKDAKGTGKAKAP
AAASALVVARDDSYLEAITQKRIRMFEDIQARQALERLNIGGEVIKVTLPDGAIKDGKKW
ITTPMDIAKEISSGLAASCLIAQVDETLWDMGRPLEGDCKLQLFKFDSNEGRDTFWHSSA
HILGESLERAYGCKLCIGPCTTRGEGFYYDAYYNDLTLNEEQFGIIESQAHKAVAEKQPF
ERIEVSRAEALEMFAENKFKVEIINELPEDKTITVYRCGPLVDLCRGPHIPNTSFVKAFA
CLKASSSYWRGKADRESLQRVYGISFPDSKRLKEYKHLLEEAKKRDHRLLGQAQELFFFH
PLSPGSCFFLPHGARVYNRLMDFMRQQYRDRGYQEVLSPNIYNMQLWETSGHAANYKENM
FVFEIEKQGFGLKPMNCPGHCLMFDNRVRSYRELPLRMADFGVLHRNELSGALTGLTRVR
RFQQDDAHIFCRENQIKDEVKGVLEFINYVYKIFGFKYELELSTRPEKYLGDIDTWNKAE
QQLTEALNEFGKPWQINKGDGAFYGPKIDIGVFDALKRKFQCATLQLDFQLPLRFKLTYS
AEDEAKLERPVMIHRAILGSVERMFAILLEHYNGKWPLWLSPRQAIVCSVSSGSVEYAKQ
VLARLHEAGFHVDIDMSDRTIQKKVREAQMAQFNYILVVGAQEAETGNVCVRVRDSADLA
TMNVDGLITRFREETAAFK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgtgcctccggcgaggcctctcgctcgtccggcagcacaccccccgcttcctc
ccctcatcgcctctccgtcccgcccgcttcctcctccaccacctctccgccgccgccggg
atgggtgagggctcctctgccgggaaggacgcaaaggggacggggaaggccaaggccccc
gccgcggcttcagccctggtcgtcgcgcgcgacgactcctacctggaggccatcacacag
aagaggatccgcatgttcgaggacatccaggcaaggcaggccctcgagcggctcaatatt
ggcggcgaggttatcaaagtaactctacctgatggcgctatcaaggacgggaagaagtgg
ataacaacaccaatggatattgctaaggagatatcaagtggattggcagctagttgtttg
atagctcaagtggatgaaacactctgggatatggggaggccactggaaggtgactgtaaa
ttgcagttgttcaaatttgatagcaatgaaggccgtgacaccttctggcactcaagtgct
catattcttggagagtctcttgagagagcgtatggctgcaagctgtgcattgggccttgc
actacaagaggagagggtttctactatgatgcttattacaatgatctgacattgaatgag
gagcagtttggtatcattgaaagccaagctcataaggctgttgcggaaaagcagccattt
gaacgcattgaggtcagcagggcagaagctcttgaaatgttcgctgaaaataaattcaag
gttgaaatcattaatgagttgcccgaggacaagactattacagtatatagatgtggtcct
ttagttgacctatgccgtggaccccacatcccgaatacttcattcgtcaaagctttcgct
tgtttgaaggcttcatcatcttattggagaggaaaagcagaccgcgaaagcctgcagaga
gtatatggaatttctttccctgattctaaacgtctcaaggaatataaacatcttttagag
gaggctaagaaacgtgatcataggttactagggcaggcgcaggaactcttctttttccat
ccacttagccctggaagctgcttcttccttccacatggtgctagggtatataacagactg
atggactttatgcgacagcagtatagagatagaggataccaagaggtgttgagcccaaat
atttacaatatgcaactttgggaaacttctggacatgctgcaaactacaaggagaatatg
tttgtttttgagattgagaaacagggatttggactgaagccaatgaattgccctggccac
tgtttaatgtttgataatagagttcgttcatacagagagttgcctcttcgcatggctgat
tttggagttcttcatagaaacgagcttagtggtgcacttacaggcttgacacgtgttagg
agattccagcaggacgatgctcatatcttttgcagagagaaccaaatcaaggatgaagtt
aagggtgttttggagttcataaattatgtttacaagatatttggcttcaaatatgagttg
gagttgtctacgaggccagagaagtatttaggtgacattgatacctggaacaaagcagag
caacaactgacagaagccttgaatgagttcgggaagccatggcagattaataaaggagat
ggtgctttctatggtcccaaaattgatattggtgtgtttgatgccctcaagaggaaattt
cagtgtgcaaccctacagctggattttcagctcccccttcgcttcaagcttacctactct
gccgaggatgaagccaaacttgaaaggccggtgatgatacacagggcaatcctaggatct
gttgaaaggatgtttgccattcttttggagcattataatggtaaatggcccttgtggcta
agccctcgccaggccattgtttgctcggtatcttcgggttcagtggaatacgcaaaacag
gttcttgccaggctacatgaagctggttttcatgttgacattgacatgagtgacaggaca
atccaaaagaaggtacgggaagcccaaatggcccaattcaactacattcttgttgtaggt
gctcaagaggcagagactggaaatgtatgcgttagggtaagagacagtgcggacctagcc
acaatgaacgttgatggcctcatcacacgtttcagggaggaaacagcagctttcaaatga
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