Setaria viridis (green foxtail): 117860074
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Entry
117860074 CDS
T07951
Name
(RefSeq) tryptophan decarboxylase 1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00350
Tyrosine metabolism
svs00360
Phenylalanine metabolism
svs00380
Tryptophan metabolism
svs00901
Indole alkaloid biosynthesis
svs00950
Isoquinoline alkaloid biosynthesis
svs00965
Betalain biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
117860074
00360 Phenylalanine metabolism
117860074
00380 Tryptophan metabolism
117860074
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
117860074
00950 Isoquinoline alkaloid biosynthesis
117860074
00965 Betalain biosynthesis
117860074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117860074
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
117860074
4.1.1.105 L-tryptophan decarboxylase
117860074
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117860074
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
QH-AmDH_gamma
Motif
Other DBs
NCBI-GeneID:
117860074
NCBI-ProteinID:
XP_034599178
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Position
6:complement(6135790..6137637)
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AA seq
516 aa
AA seq
DB search
MGSLDTNPTGLQLPDGAIDDADADVFRPLDSDDVRSDLHKAVDFVADYLQSVESLPVLPD
VEPGYLRRLLNPTPPASSAPFDVAMKELRAAVVPGTTHWASPNFFAFFPATNSAAAIAGE
LVASAMNTVGFTWQAAPAATELEDLALDWLAQLLRLPPAFVTCGGGTGGGGVILGTTSEA
MLVTLVAARDAALRRTGRGGVSGLPRLVAYATDQTHSTFFKVCRLAGLDPANVRTIPTGT
ETEYALDVAELCRRMQADVDAGLVPTYVCATVGATSTNAVDPIADTADVARHFGAWVHVD
AAYAGSACICPEFRHHLDGVERVDSISMSPHKWLLTCLDCTCLWVRNTRRLTDSLETNPE
YLRNDASDSGAVTDVKDMQVGVGHRFRGLKLWMVMRTYGAAKLQQHIRSDVAMAKMFEDS
VRADDRFEVVVLRNFALVCFRIRARGAMTEEDADEASRELMARLNRTGNVFLAHTVVGGR
FVLRFAVGSTLQEERHVRGAWELIEKTAGEILHGRA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggggagcttggacacgaaccccacaggcttgcagttgccggacggcgcgatcgacgac
gccgacgctgacgtgttccggccgctcgactccgacgacgtgcgctcggacctccacaag
gccgtcgacttcgtcgctgactacctccagtccgtcgagtccctccctgtcctcccggac
gtcgagccggggtacctgcggcggctgctcaacccaacgccgccggcgtcctcggcgccg
ttcgacgtcgcgatgaaggagctccgcgccgcggtggttcccggcacgacgcactgggcc
agccccaactttttcgccttcttcccggcgaccaacagcgcggccgccatcgccggggag
ctcgtcgcctccgccatgaacaccgtggggttcacctggcaggccgcgccggccgccacg
gagctcgaggacctcgcgctcgactggctcgcgcagctactccgcctgccgccggccttc
gtgacctgcggcggcggtaccggcggcggcggcgtcatcctcgggacgacgagcgaggcg
atgctggtcacgctcgtcgcggcgcgcgacgccgccctgcgacggaccgggcgcggcggc
gtgtccggcctgccgcgtctcgtcgcgtacgccacggaccaaacgcactccaccttcttc
aaggtgtgccgccttgccggcctcgacccggccaacgtccggaccatcccgaccggcaca
gagacggagtacgcgctcgacgtggcggagctctgccgccgcatgcaggccgacgtggac
gccggcctcgtcccgacctacgtgtgcgccacggtcggcgccacgtcgacgaacgctgtc
gatcccatcgccgacacggccgacgtggcacgacacttcggcgcgtgggtccacgtcgac
gccgcgtacgctggcagcgcgtgcatctgcccggagttccggcaccacctcgacggcgtg
gagcgcgtcgattccatcagcatgagtccgcacaagtggctgctgacgtgcctcgactgc
acctgcctgtgggtccgcaacacgcgccggctcaccgactcgctggagaccaacccggag
tacctcaggaacgacgccagcgactccggcgccgtcaccgacgtcaaggacatgcaggtc
ggcgtcggccaccgcttccgggggctcaagctctggatggtcatgcgcacctacggcgcc
gccaagctccagcagcacatccgcagcgacgttgccatggccaagatgttcgaggacagt
gtccgggccgatgaccggttcgaggtcgtcgtgctgaggaactttgccctagtctgcttc
aggatcagagcacgcggcgccatgacggaggaggacgccgacgaggctagccgggagctc
atggcgcggctgaacaggacggggaacgtgttcttggcgcatacggtggtcggcggcagg
ttcgttctgcggttcgcggtggggtcgacgctgcaggaggagaggcacgtgcgaggtgcg
tgggagctcatcgagaagacggccggtgagatattgcacggacgagcatag
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